Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_0545 |
Symbol | |
ID | 5195154 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 613104 |
End bp | 613976 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640584997 |
Product | thioredoxin |
Protein accession | YP_001265897 |
Protein GI | 148545795 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3118] Thioredoxin domain-containing protein |
TIGRFAM ID | [TIGR01068] thioredoxin |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCAAG ACACGCCTTA CATTTTCGAC GCCACCGATA CCAACTTCCA GCAACTGGTG ATCGAGAACT CCTTCCACAA GCCAGTGCTG GTGGACTTCT GGGCCGAGTG GTGCGCGCCG TGCAAGGCGC TGATGCCATT GCTGGCAAAG ATTGCCGAGG GTTACCAGGG CGAACTGCTG CTGGCCAAGA TCAACTGCGA CGTGGAGCAA CAGGTGGTTG CCCAGTTCGG CATCCGTAGC CTGCCGACAG TGGTGCTGTT CAAGGACGGT CAGCCGGTGG ACGGTTTTGC CGGGGCGCAA CCGGAGTCGG CGATCCGCGC CATGCTCGAG CCGCATGTAC AACTGCCAGC CGCGCCCACC GCCTCGCCAC TGGAGCAGGC AAAGGCGCTG TTTGCCGAAA GCCGTTTTGC CGAAACCGAA GCGCTGTTGC AGGCGCTGCT GGGTGAGGAC AACAGCAATG TCGAGGCGCT GATCCTGTAT GCCCGCTGCC TGGCCGAGCG TGGCGAGCTG GGCGAAGCGC AAGTGGTGCT GGATGCGGTC AAGACTGACG AACACAAAGC TGCACTGGCC GGTGCCAAGG CCCAGCTGAC CTTCCTGCGC CAGGCTGCCA GCCTGCCGGA AGTGGCAGAC CTTAAAAGCC GTCTGGCGCA GAACCCGCAA GACGACGAGG CGGCTTATCA GCTGAGCATT CAGCAACTGG CGCGCCAGCA GTATGAGGCG GCGCTGGAGG GGCTGCTGAA GCTGTTCCAG CGTAACCGTG GCTACGAGAA CGGGCTGCCG CAGAAGGCGC TGTTGCAGGT GTTCGAATTG CTGGGTGGCG ATCACCCGCT GGTTGGTGTT TATCGTCGCA AGCTGTCGGC GGCGATGTTC TGA
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Protein sequence | MTQDTPYIFD ATDTNFQQLV IENSFHKPVL VDFWAEWCAP CKALMPLLAK IAEGYQGELL LAKINCDVEQ QVVAQFGIRS LPTVVLFKDG QPVDGFAGAQ PESAIRAMLE PHVQLPAAPT ASPLEQAKAL FAESRFAETE ALLQALLGED NSNVEALILY ARCLAERGEL GEAQVVLDAV KTDEHKAALA GAKAQLTFLR QAASLPEVAD LKSRLAQNPQ DDEAAYQLSI QQLARQQYEA ALEGLLKLFQ RNRGYENGLP QKALLQVFEL LGGDHPLVGV YRRKLSAAMF
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