| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0538 |
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| Symbol | |
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| ID | 5191284 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 607298 |
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| End bp | 608503 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640584990 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001265890 |
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| Protein GI | 148545788 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.925567 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACCTT CGCTGACACG CTGGATAACC CTGTTGCTTG CCACCACCAG TGCGATGGCT
GTGGCAACGG TGTACTTCGC TCAACCGCTG CTTGAGTCGA TGGCTGCTGA GTTGGGGGTG
GCGCAACAGC AGATTGGCTG GGTCGTTGGC GCGACCCAGG GGGGTTACGC CCTGGGGCTG
CTACTGATTG TGCCCCTCGG GGACTTGGTC GACCGTAAAC GTCTGTTGCT TGGCCAGTTG
CTGTTCTCGG CGCTTGCGCT GGTCGGCGTT GGCATGGCGC CGAACTGGGC AATATTGCTG
CTGGCTCTGG CTATCGCCGG GTTGATGGCA GTCATGGTGC AGGTGATGGT GGCTCATGCC
GCGAGCCTGG CCTCACCTGG TCAGCAAGGG CAGGCGGTAG GCACCGTCAC CAGTGGTGTG
GTGCTGGGTA TTCTGCTGGC ACGGCTGGCT TCGGGCGGGC TCGCTGACCT GGCCGGTTGG
CGAAGTGTGT ACCTGGTCGC CGCAGGGCTC TTGATGGTGT TGGCGCTGGT GCTGTGGCGC
AGTCTGCCCG GCGGGCAGCC GATGAGGAGT CGGCCGGGTT ACCGGGCGCT GATCATGGCC
CAGTTCAGCC TGTATCGGCA CGACCGGTTG CTGCGCCAGC GCGGCGTGTT CGGTGTGTTG
ATCTTCGCCG CATTCAGCGT GCTGTGGAGT GCCATGGTCA TGCCGCTCAG TGCTGCGCCG
CTGGCGCTGA GCCATACCGA GATCGGCCTG TTTGGCCTGG CAGGTGTCGC GGGTACGCTG
GCGGCTTCGC ATGCCGGTCG TCTGGCCGAC CTTGGAAGGG GTGAGCGTAC GACCGGGGTG
TCGTTGGCCC TGCTGACGCT GTCGTGGCTG CCAACAGCGT TCGTCGAGCA TTCACTGCTG
GCCTTCGTGC TGGGTGTGCT GATGCTGGAC TTTGCCGTGC AGGCAGTGCA TGTCACCAAC
CAGAGCCTGT TGCTGGCGGG GCGTGGTGCG ATGGCTAGCC GTTTGATCGG CGCCTATATG
TGTTGCTATT CGCTGGGCAG CGGTTTGGGG GCGGTGTTGG CGAGCTGGGT GTATGCACAC
TGGGGCTGGG TTGCCGTGTG TGGGCTTGGC ATGGGCATCA GTGCCGTCGC ACTGTGCTAC
TGGCTATGGC TGCAACGCGC GAGGGCGGCC GAAGCCGCCC TGCAATGTTC AGGTCAGAAC
TTGTAG
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| Protein sequence | MTPSLTRWIT LLLATTSAMA VATVYFAQPL LESMAAELGV AQQQIGWVVG ATQGGYALGL
LLIVPLGDLV DRKRLLLGQL LFSALALVGV GMAPNWAILL LALAIAGLMA VMVQVMVAHA
ASLASPGQQG QAVGTVTSGV VLGILLARLA SGGLADLAGW RSVYLVAAGL LMVLALVLWR
SLPGGQPMRS RPGYRALIMA QFSLYRHDRL LRQRGVFGVL IFAAFSVLWS AMVMPLSAAP
LALSHTEIGL FGLAGVAGTL AASHAGRLAD LGRGERTTGV SLALLTLSWL PTAFVEHSLL
AFVLGVLMLD FAVQAVHVTN QSLLLAGRGA MASRLIGAYM CCYSLGSGLG AVLASWVYAH
WGWVAVCGLG MGISAVALCY WLWLQRARAA EAALQCSGQN L
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