Gene Pput_0508 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_0508 
Symbol 
ID5191692 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp576286 
End bp576453 
Gene Length168 bp 
Protein Length55 aa 
Translation table11 
GC content57% 
IMG OID640584962 
Productribosomal protein L36 
Protein accessionYP_001265862 
Protein GI148545760 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0257] Ribosomal protein L36 
TIGRFAM ID[TIGR01022] ribosomal protein L36, bacterial type 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.130854 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00874206 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGCAGCGG TTTGCTGCGC TGATACGCCC CTAAGGTTCG AGGAGTCGGT AATGAAAGTT 
CGTGCATCGG TGAAAAAGCT GTGCCGTAAC TGCAAGATCA TCCGTCGCGA AGGCGTCGTA
CGAGTGATCT GCAGCGCGGA ACCGCGTCAC AAACAGCGCC AAGGCTGA
 
Protein sequence
MAAVCCADTP LRFEESVMKV RASVKKLCRN CKIIRREGVV RVICSAEPRH KQRQG