| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0478 |
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| Symbol | rplJ |
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| ID | 5193278 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 551463 |
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| End bp | 552050 |
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| Gene Length | 588 bp |
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| Protein Length | 195 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640584931 |
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| Product | 50S ribosomal protein L10 |
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| Protein accession | YP_001265832 |
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| Protein GI | 148545730 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0244] Ribosomal protein L10 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.00597987 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00527924 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGTGCTCC CGATTCGTTA CCGAATCAGA CACCAAAACG ACATCCGGCC TCGGCCAGAT
GAAACGGTAA AAACCAGGAG TAAACCCGTG GCAATTAAAC TCGAAGACAA GAAGGCCATC
GTCGCTGAAG TCAACGAGGC TGCCAAAGTC GCTCTGTCCG CTGTCGTGGC TGATGCCCGT
GGTGTGACTG TAAGCGCAAT GACCGGACTC CGTAAAGAGG CCCGCGAAGC TGGCGTATAC
GTACGTGTAG TGCGTAATAC CCTGCTCAAG CGCGCTGTTG AAGGCACCGA ATTCTCGATC
CTCAACGACG CGTTCAAAGG CCCGACCCTG ATTGCTTTCT CCAACGAACA CCCGGGCGCT
GCTGCTCGTC TGTTCAAAGA GTTCGCCAAG GGTCAGGACA AGTTCGAGAT CAAGGCAGCT
GCGTTTGACG GCAATTTCAT TGCAGCGAAC CAGATCGACG TGTTGGCTAC CCTGCCGACC
CGCGACGAAG CTATTGCACG ACTGATGAGC GTTATTCAAG GCGCCACCAG CAAGCTGGCT
CGTACTCTGG CAGCCATTCG CGACCAGAAA GAAGCTACCG CCGCCTAA
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| Protein sequence | MVLPIRYRIR HQNDIRPRPD ETVKTRSKPV AIKLEDKKAI VAEVNEAAKV ALSAVVADAR
GVTVSAMTGL RKEAREAGVY VRVVRNTLLK RAVEGTEFSI LNDAFKGPTL IAFSNEHPGA
AARLFKEFAK GQDKFEIKAA AFDGNFIAAN QIDVLATLPT RDEAIARLMS VIQGATSKLA
RTLAAIRDQK EATAA
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