Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_0475 |
Symbol | nusG |
ID | 5191259 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 549573 |
End bp | 550106 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640584928 |
Product | transcription antitermination protein NusG |
Protein accession | YP_001265829 |
Protein GI | 148545727 |
COG category | [K] Transcription |
COG ID | [COG0250] Transcription antiterminator |
TIGRFAM ID | [TIGR00922] transcription termination/antitermination factor NusG |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0000120697 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0264815 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCTAAGC GTTGGTATGT TGTGCATGCT TACTCGGGTT ACGAGAAGCA TGTAATGCGC TCCCTCATCG AGCGCGTCAA GCTGGCTGGC ATGGAAGACG GTTTCGGCGA GATCTTGGTC CCGACCGAAG AAGTCGTCGA AATGCGCAAC GGCCAGAAGC GCAAGAGTGA GCGTAAATTC TTCCCTGGCT ATGTACTGGT CCAGATGGAG ATGAATGAAG GGACTTGGCA CTTGGTCAAG GATACCCCTC GCGTGATGGG CTTTATCGGC GGTACTGCTG ACAAGCCTGC GCCGATTACC GATAAAGAAG CTGAGGCCAT CCTGCGTCGC GTTGCCGACG GTAGCGATAA GCCGAAGCCC AAGACGCTGT TCGAGCCAGG TGAAGTGGTT CGAGTCATTG ATGGTCCGTT CGCTGACTTC AATGGTAGTG TCGAAGAAGT TAACTACGAA AAGAGTCGCC TGCAGGTTGC GGTGCTCATT TTCGGTCGCT CTACTCCGGT GGAGCTCGAG TTCAGCCAGG TCGAAAAGGT CTAG
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Protein sequence | MAKRWYVVHA YSGYEKHVMR SLIERVKLAG MEDGFGEILV PTEEVVEMRN GQKRKSERKF FPGYVLVQME MNEGTWHLVK DTPRVMGFIG GTADKPAPIT DKEAEAILRR VADGSDKPKP KTLFEPGEVV RVIDGPFADF NGSVEEVNYE KSRLQVAVLI FGRSTPVELE FSQVEKV
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