Gene Pput_0475 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_0475 
SymbolnusG 
ID5191259 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp549573 
End bp550106 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content55% 
IMG OID640584928 
Producttranscription antitermination protein NusG 
Protein accessionYP_001265829 
Protein GI148545727 
COG category[K] Transcription 
COG ID[COG0250] Transcription antiterminator 
TIGRFAM ID[TIGR00922] transcription termination/antitermination factor NusG 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000120697 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0264815 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTAAGC GTTGGTATGT TGTGCATGCT TACTCGGGTT ACGAGAAGCA TGTAATGCGC 
TCCCTCATCG AGCGCGTCAA GCTGGCTGGC ATGGAAGACG GTTTCGGCGA GATCTTGGTC
CCGACCGAAG AAGTCGTCGA AATGCGCAAC GGCCAGAAGC GCAAGAGTGA GCGTAAATTC
TTCCCTGGCT ATGTACTGGT CCAGATGGAG ATGAATGAAG GGACTTGGCA CTTGGTCAAG
GATACCCCTC GCGTGATGGG CTTTATCGGC GGTACTGCTG ACAAGCCTGC GCCGATTACC
GATAAAGAAG CTGAGGCCAT CCTGCGTCGC GTTGCCGACG GTAGCGATAA GCCGAAGCCC
AAGACGCTGT TCGAGCCAGG TGAAGTGGTT CGAGTCATTG ATGGTCCGTT CGCTGACTTC
AATGGTAGTG TCGAAGAAGT TAACTACGAA AAGAGTCGCC TGCAGGTTGC GGTGCTCATT
TTCGGTCGCT CTACTCCGGT GGAGCTCGAG TTCAGCCAGG TCGAAAAGGT CTAG
 
Protein sequence
MAKRWYVVHA YSGYEKHVMR SLIERVKLAG MEDGFGEILV PTEEVVEMRN GQKRKSERKF 
FPGYVLVQME MNEGTWHLVK DTPRVMGFIG GTADKPAPIT DKEAEAILRR VADGSDKPKP
KTLFEPGEVV RVIDGPFADF NGSVEEVNYE KSRLQVAVLI FGRSTPVELE FSQVEKV