| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0469 |
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| Symbol | |
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| ID | 5192381 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 538063 |
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| End bp | 539262 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640584913 |
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| Product | tyrosyl-tRNA synthetase |
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| Protein accession | YP_001265823 |
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| Protein GI | 148545721 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0162] Tyrosyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00234] tyrosyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000000169724 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.000126716 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAAGTCGG TTGAAGAGCA GCTGGCGCTT ATCAAGCGCG GTGCGGAAGA AGTACTGGTC
GAGTCGGAAC TGGTGGAGAA GCTCAAGCGC GGCCAACCTC TGCGCATCAA GGCCGGCTTC
GACCCGACCG CTCCGGACCT GCACCTGGGT CACACGGTGC TGATCAACAA GCTGCGCCAG
TTCCAGGATC TGGGCCACCA GGTCATCTTC CTGATCGGTG ACTTCACCGG CATGATCGGT
GACCCGAGTG GCAAGAGCGC CACGCGCCCG CCGCTGACCC GCGAACAGGT GCTGGAGAAC
GCCGAGACGT ACAAGCAGCA GGTGTTCAAG ATTCTTGACC CGGCCAAGAC TGAAGTCGCG
TTCAACTCCA CGTGGATGGA CAAGCTGACC CCTGCCGACT TCATTCGCCT GGCTTCGCAG
TACACCGTCG CGCGCATGCT GGAGCGTGAT GACTTCGACA AGCGTTACAC CACCAATCAG
CCGATTGCCA TCCACGAGTT CCTCTACCCG CTGGTGCAAG GCTATGACTC GGTGGCGCTG
AAGGCGGATG TTGAGCTGGG TGGTACCGAC CAGAAGTTCA ACCTGCTGAT GGGGCGTGAA
CTGCAGCGGT CTTATGGGCA GGAAGCGCAG AACATCGTGA CCATGCCACT GCTCGAAGGG
CTCGACGGTG TGAAGAAGAT GTCGAAGTCG CTGGGCAACT ATGTCGGCAT CCAGGAAGCG
CCAGGGGTGA TGTACAGCAA GCTGGTGTCG ATCCCGGATA CCCTGATGTG GCGTTACTTC
GAGCTGCTGA GCTTCCGTTC GATGGAAGAA ATCGAGCAGT TCCGGGCCGA TGTTGCCAAT
GGCGCCAACC CACGTGACAT CAAGATCAAG CTGGCGGAAG AAATTGTGGC GCGCTTCCAC
GGTGAGGAGG CTGCAGCCAA TGCTCACCGT GCTGCCGGTA ACCGTATGAA GGAAGGCGAG
CTGCCGGAAG ACTTGCCGGA GATCGAAGTG GCTGCGGCGG AAGACCTGCC AATTGCTGCG
GTGTTGAATC GGGCTGGTCT GGTCAAGAAC TCGGCTCAGG CGCGAGATTT GCTGAGTGGC
GGCGCGGTGA AGGTTGATGG TGCAGTGGTC GACAAGGACT TCATGTTTGT CCTTGGTGCT
ACGCATGTGT GCCAGGCGGG CAAGAAGTCG TTTGGCCGGG TCACCCTCAA GGCAGAGTAA
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| Protein sequence | MKSVEEQLAL IKRGAEEVLV ESELVEKLKR GQPLRIKAGF DPTAPDLHLG HTVLINKLRQ
FQDLGHQVIF LIGDFTGMIG DPSGKSATRP PLTREQVLEN AETYKQQVFK ILDPAKTEVA
FNSTWMDKLT PADFIRLASQ YTVARMLERD DFDKRYTTNQ PIAIHEFLYP LVQGYDSVAL
KADVELGGTD QKFNLLMGRE LQRSYGQEAQ NIVTMPLLEG LDGVKKMSKS LGNYVGIQEA
PGVMYSKLVS IPDTLMWRYF ELLSFRSMEE IEQFRADVAN GANPRDIKIK LAEEIVARFH
GEEAAANAHR AAGNRMKEGE LPEDLPEIEV AAAEDLPIAA VLNRAGLVKN SAQARDLLSG
GAVKVDGAVV DKDFMFVLGA THVCQAGKKS FGRVTLKAE
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