Gene Pput_0444 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_0444 
Symbol 
ID5193727 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp513543 
End bp514172 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content62% 
IMG OID640584888 
Producttwo component LuxR family transcriptional regulator 
Protein accessionYP_001265798 
Protein GI148545696 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.577588 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATTCGAG TACTGGTGGC CGAAGACCAC ACCATTGTCC GTGAAGGCAT CAAGCAGTTG 
ATTGGCCTGG CCAAGGACAT GCAAGTGGCG GGGGAGGCCG GTAATGGCGA GCAGTTGCTC
GAAACCCTGC GCCACACACC GTGCGAGGTG GTACTGCTGG ATATCTCGAT GCCGGGTGTG
AACGGCCTGG AGGCGATCCC GCGTATCCGT GCGCTGCACG ATGCTCCAGC GATCCTGATG
TTGTCGATGC ACGATGAGGC ACAGATGGCG GCGCGGGCGC TGAAGGCCGG TGCGGCGGGC
TATGCCACCA AAGACAGTGA TCCGGCGTTG TTGTTGACAG CGATTCGTCG GGTGGCCGGT
GGCGGGCGTT ATATCGACCC GTCGCTGGCC GACCGCATGG TGTTCGAAGT AGGCCTCACC
GAATCCCGGC CGTTGCACAC ACTGCTCTCG GAGCGCGAGT TTTCAGTGTT CGAGCGCCTG
GCCCAAGGCG CCAACGTCAA CGACATCGCC CAGCAGTTGG CGCTGTCGAG CAAGACCATC
AGCACCCACA AGGCACGCCT GATGCAGAAG TTGAAAGTGA ACTCGCTGGC GGAGCTGGTG
AAGTACGCCA TGGAGCACAA GCTGGTCTGA
 
Protein sequence
MIRVLVAEDH TIVREGIKQL IGLAKDMQVA GEAGNGEQLL ETLRHTPCEV VLLDISMPGV 
NGLEAIPRIR ALHDAPAILM LSMHDEAQMA ARALKAGAAG YATKDSDPAL LLTAIRRVAG
GGRYIDPSLA DRMVFEVGLT ESRPLHTLLS EREFSVFERL AQGANVNDIA QQLALSSKTI
STHKARLMQK LKVNSLAELV KYAMEHKLV