| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0412 |
|---|
| Symbol | |
|---|
| ID | 5194893 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | + |
|---|
| Start bp | 477112 |
|---|
| End bp | 477678 |
|---|
| Gene Length | 567 bp |
|---|
| Protein Length | 188 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640584858 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001265769 |
|---|
| Protein GI | 148545667 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2856] Predicted Zn peptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTTTA TCCGGAAGAG TGGTAAGTCA AAGTCAGTCG ATACTTCGCA TGTAAGTGAA
GTCGCTTCGG TTGATGAGAG ATTTACAGTT GATCAGTTGC TCGCACTTGC GGTGCAGCAC
GAAGTCGACA CATCTCCTTT GGATGTGAAG TCTCTTCTGT CCGTTTTGGG TATTAAACTG
TTAAGCGTTC CAATGAGTGA TGATGTCTCA GGAATGCTGA GTCTCGCTGA TAATAGTAAG
GATTGGGTGG TGAAAGTAAA TGCGCTCCAC CACCCTAACA GGCAACGATT TACTATTGCG
CATGAAATCG CACATTTTTC TCGGCACAGG TTTCAGCAAG CCGAGTTTAA AGACCTAAAT
TTTTTCCGAA ATGGCGAAAG CAATCCAATG GAGGTTGAGG CCAACCGATT CGCTAGCGAG
CTTTTGATGC CTGAATCAGC TTTCAGAGAT AAGGTTAAGG TATTTTCCGG CAGTATTGAA
GAAATCGCAC AATACTTTAA GGTCTCAACC TTGGCAGTGC GCGTCCGAGC AAAGAATTTA
GGAATGAAGG GACATGGATT GGAATAG
|
|---|
| Protein sequence | MAFIRKSGKS KSVDTSHVSE VASVDERFTV DQLLALAVQH EVDTSPLDVK SLLSVLGIKL
LSVPMSDDVS GMLSLADNSK DWVVKVNALH HPNRQRFTIA HEIAHFSRHR FQQAEFKDLN
FFRNGESNPM EVEANRFASE LLMPESAFRD KVKVFSGSIE EIAQYFKVST LAVRVRAKNL
GMKGHGLE
|
|---|
| |