| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0376 |
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| Symbol | |
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| ID | 5194456 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 435192 |
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| End bp | 437624 |
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| Gene Length | 2433 bp |
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| Protein Length | 810 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640584822 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_001265733 |
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| Protein GI | 148545631 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.319241 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCGTG CCGTTGATCA TATTCTGCGC CCCAGCCTGA TGGCCCTGGC CATCGGCCTG
GCTGCCCCGC TGACCAGCCC TGCCTTGTTC GCCGCCGAGC AATCCATGTC GCGCGCCTAC
AACCTGCCCA GCGCGCCACT GGCCACCACC CTCAACCAGA TCGCCAGCCA GGCCGGCATT
GCCTTGGCCA TCGACCCGGC ACTGGTCAGC GGACGCACCT CGGCCCCGGT AAGTGGCCAA
TACGACGGCC TGGGCGCCCT GCAAGCCGCC CTGAGCGGTA CCGGCCTGCA GTTGCAGCAG
AGCCGTGCGG GCAGCTACAG CCTGGTGGCC GTGCCGGATG GCACACTGGC CTTGCCGGAA
ACCACCGTGA ATGCCACCAG CGCCAGCGAA AGCGCCTGGG GCCCGGTTGA AGGCTACGTG
GCCAAGCGCA CTGCTGCTGG CACCAAGACT GACACGGCAC TTGTGGAGGT CCCCCGCTCC
ATCTCTGTGG CCACCCGCGA GCAAATGAAA GACCGCGGTG TACACAGCCT GGATGATGCA
GTGCGCTATA TGCCAGGTAT CGTCTCCGCC AGCTTCGGCA GCGATACGCG GTATGACTGG
ATGCGCGTGC GCGGCTTCGA GCCAACGCAA TTTCTGGATG GGCTGCCGCT GCCACGCGGG
GTGTATGCCA ACCCGAAAGC CGAAACCTGG AACCTCGACC GCCTCGCCCT GCTGCGCGGC
CCGGCCTCTT CGATCTACGG CCAGACCCCA CCTGGCGGCC TGCTGGACAT GGTCAGCCGC
CGTCCGCAAG CGGAAAGCGC TCACGAAATC GAGCTTCAAT ACGGCAGCGA CAACCATCGC
CAGATCAACT TCGCCAGCAC CGGCAAGATC GACGATGAAG GTCGCTTTCT CTATGGCGTC
AGTGGCGTTA TCCGTGACAG TGGCACCCAG ATCGACCACA TCGACAACAA GCGCTACAAC
ATTGCCCCAA GCCTGACCTG GAACATTGAC GAAGACACGA CGCTGACCTT CCTGACCCAG
TTCACCCGTG ACGATACCGG TGCCACCAGC CAATTCCGGC CCATCCAGGG CACCAAGATC
GACATGCCGT TCGGCAAGAT CTCGCACCAC AAGAACCTGG GTGACCCGGA TTACGAGTTC
TACGACCGTA CTTACTACGC GCTGGGTTAC GCCTTCGAAC ACCGCATCAA CGACGTCTGG
CAGTTCCGCC AGAACCTGCG CTACACCAAG TCAGACCTGT CGTTCCAGAC CATCACCCCT
GGCAGTTACT ACGAGCCCGG CGGCCCGGTC AAAGACGATG GCACTGTCAG CCGCATGTCC
ACCAACACCG ATGAAGACAT CAGCCAGTTC GCGGTGGACA ACAACTTCCA GGCGGACTTC
GCGACCGGGG ACATCAACCA CACGCTGTTG ATCGGCCTGG ACCACCAGCG CATCAACACC
AACTACCTGT CGATCTTCGA CTTCACCGTG CCGGACAGCA ACGTCAACAA CCCGGTCTAC
GGGCTGCCGA TCACTCGCCC GGATCGCTCG ACCGCGTTTT ACGACTACAA CCAGAAAACC
CGTCAGACCG GCCTGTATGT GCAGGACCAG ATGGTGCTTG GTAACTGGCG CCTGACCCTG
GGCGGTCGTG AAGACTGGGT GCACACCGGC ACCAAGTTCT TCAACCAGGG CGATGCCACC
AATACCCAGC GGGACAAGAA GTTCAGCGGC AACGCAGCCA TCAGCTACGT GTTCGACTCA
GGCTTCGTGC CGTACCTGTC CTATGCCGAG TCGTTCCAGC CGTCCAGCAA TGCCAGTGTG
TCGGCCTCGG ACTCGTTCAA GCCCACCGAA GGCAAACAGT GGGAGCTGGG CGTGAAGTAT
CAGCCGCCGG GGTCCAACAC CCTGTTGTCG GCAGCCGTGT ACGACCTGAC TCAGAAAAAC
GTCTCGGTCA CCAACACGGT CGGTGGTGTG ACCATCACCA GCCAGACCGG TGAAGTGAAA
GTCCGCGGCC TTGAGCTGGA AGCGGTTTCC GATGTGACCG ACAACCTGAA GGTGATTGCC
GCCTACACCC TGGCCAAGTC CGAGGTGCAG GATGGCGATT TCAAAGGTAA CCGCCTGCAA
CTGATGCCTA ACCAGCAAGC GTCCATCTGG GGCGACTACA CCTGGCACTC AGGCGTACTC
GACGGCTTCG GCATAGGCCT GGGCGCGCGT TATACCGGTA ATACCTACGG TGACCAAGGC
AATACCTACC TGGGCAAGGC CAAGGCCTAC ACCGTCTTCG ACGGGTCGGT GCATTACGAC
CTGGGTCGCC TGAACGGCAG CCTGAAGGGC GCGTCGGTCG CGGTCACCGC CACCAACCTG
CTGAACAAGG ACTACCTCTC TACTTGTGAC GCGTACTACT GCTACTACGG CGATGAGCGC
AGCGTTGTCG CCAGCGCCAC TTACAAGTTC TGA
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| Protein sequence | MSRAVDHILR PSLMALAIGL AAPLTSPALF AAEQSMSRAY NLPSAPLATT LNQIASQAGI
ALAIDPALVS GRTSAPVSGQ YDGLGALQAA LSGTGLQLQQ SRAGSYSLVA VPDGTLALPE
TTVNATSASE SAWGPVEGYV AKRTAAGTKT DTALVEVPRS ISVATREQMK DRGVHSLDDA
VRYMPGIVSA SFGSDTRYDW MRVRGFEPTQ FLDGLPLPRG VYANPKAETW NLDRLALLRG
PASSIYGQTP PGGLLDMVSR RPQAESAHEI ELQYGSDNHR QINFASTGKI DDEGRFLYGV
SGVIRDSGTQ IDHIDNKRYN IAPSLTWNID EDTTLTFLTQ FTRDDTGATS QFRPIQGTKI
DMPFGKISHH KNLGDPDYEF YDRTYYALGY AFEHRINDVW QFRQNLRYTK SDLSFQTITP
GSYYEPGGPV KDDGTVSRMS TNTDEDISQF AVDNNFQADF ATGDINHTLL IGLDHQRINT
NYLSIFDFTV PDSNVNNPVY GLPITRPDRS TAFYDYNQKT RQTGLYVQDQ MVLGNWRLTL
GGREDWVHTG TKFFNQGDAT NTQRDKKFSG NAAISYVFDS GFVPYLSYAE SFQPSSNASV
SASDSFKPTE GKQWELGVKY QPPGSNTLLS AAVYDLTQKN VSVTNTVGGV TITSQTGEVK
VRGLELEAVS DVTDNLKVIA AYTLAKSEVQ DGDFKGNRLQ LMPNQQASIW GDYTWHSGVL
DGFGIGLGAR YTGNTYGDQG NTYLGKAKAY TVFDGSVHYD LGRLNGSLKG ASVAVTATNL
LNKDYLSTCD AYYCYYGDER SVVASATYKF
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