Gene Pput_0366 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_0366 
Symbol 
ID5192944 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp424009 
End bp425058 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content65% 
IMG OID640584812 
Productlipopolysaccharide heptosyltransferase II 
Protein accessionYP_001265723 
Protein GI148545621 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0859] ADP-heptose:LPS heptosyltransferase 
TIGRFAM ID[TIGR02195] lipopolysaccharide heptosyltransferase II 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAATAC TGATCATTGG CCCCAGCTGG GTCGGCGACA TGGTGATGGC GCAGACCCTG 
TTCCAGTGCC TGAAACAGCA GCACCCCGAC TGCGTGATCG ACGTGCTGGC CCCTGAATGG
AGCCGGCCGA TCCTCGAACG CATGCCTGAA GTGCGTCAGG CCTTGAGCTT CCCGCTCGGC
CACGGCGCGC TGGAGCTGGC CACACGTCGG CGCATCGGCA AGTCCCTGGC CGGCCAGTAC
GACCAGGCTA TCCTGCTGCC CAACTCGCTC AAGTCGGCGC TGGTGCCCTT TTTTGCCGGC
ATTCCCAAAC GCACCGGCTG GCGCGGTGAA ATGCGCTTCG GCCTGCTGAA CGATGTGCGC
AAGCTGGACA AGGCCCGCTA CCCGCTGATG ATCGAGCGCT TCATGGCCCT GGCGTACGCG
CCCGGCGCCG AGCTGCCGCA GCCATACCCG CGCCCCAGCC TGCAGATCGA AGCGCAAAGC
CGTGACGCCG CCCTGGCCAA GTTCGGCCTG GAACTGGACC GTCCGGTACT GGCGCTGTGC
CCTGGCGCCG AGTTTGGCGA AGCCAAGCGC TGGCCGGCAG AGCACTATGC CGCTGTGGCC
GATGCGATGA TTCGCCAAGG CTGGCAAGTG TGGCTGTTTG GCTCGAAGAA CGATCACTCG
GTCGGTGAGC AGGTCCGCGA CCGGCTGATT CCGGGGTTCC GTGAAGAGTC GTCCAACCTG
GCCGGTGAGA CCTCGCTGGC CGAGGCCATC GACCTGATGT CCTGCGCCCA TGCCGTGGTG
TCCAACGATT CCGGCCTGAT GCACGTGGCC GCTGCGCTGA ACCGTCCGTT GGTGGCGGTG
TACGGCTCGA CTTCCCCCGG CTTCACCCCA CCGTTGGCCG AACAGGTGGA AGTGGTGCGC
ACCGGTATCG AGTGCAGCCC GTGCTTTGAC CGCACCTGTC GCTTCGGCCA TTACAATTGC
CTGCGTCTGC TGGAACCGGG CAAAGTGATT GCCGCCCTGC ACAGCCTCAG CGGACCGGAC
CTGATCGATA CCGTGGCCGA GGTCGACTAA
 
Protein sequence
MRILIIGPSW VGDMVMAQTL FQCLKQQHPD CVIDVLAPEW SRPILERMPE VRQALSFPLG 
HGALELATRR RIGKSLAGQY DQAILLPNSL KSALVPFFAG IPKRTGWRGE MRFGLLNDVR
KLDKARYPLM IERFMALAYA PGAELPQPYP RPSLQIEAQS RDAALAKFGL ELDRPVLALC
PGAEFGEAKR WPAEHYAAVA DAMIRQGWQV WLFGSKNDHS VGEQVRDRLI PGFREESSNL
AGETSLAEAI DLMSCAHAVV SNDSGLMHVA AALNRPLVAV YGSTSPGFTP PLAEQVEVVR
TGIECSPCFD RTCRFGHYNC LRLLEPGKVI AALHSLSGPD LIDTVAEVD