Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_0366 |
Symbol | |
ID | 5192944 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 424009 |
End bp | 425058 |
Gene Length | 1050 bp |
Protein Length | 349 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640584812 |
Product | lipopolysaccharide heptosyltransferase II |
Protein accession | YP_001265723 |
Protein GI | 148545621 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
TIGRFAM ID | [TIGR02195] lipopolysaccharide heptosyltransferase II |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAATAC TGATCATTGG CCCCAGCTGG GTCGGCGACA TGGTGATGGC GCAGACCCTG TTCCAGTGCC TGAAACAGCA GCACCCCGAC TGCGTGATCG ACGTGCTGGC CCCTGAATGG AGCCGGCCGA TCCTCGAACG CATGCCTGAA GTGCGTCAGG CCTTGAGCTT CCCGCTCGGC CACGGCGCGC TGGAGCTGGC CACACGTCGG CGCATCGGCA AGTCCCTGGC CGGCCAGTAC GACCAGGCTA TCCTGCTGCC CAACTCGCTC AAGTCGGCGC TGGTGCCCTT TTTTGCCGGC ATTCCCAAAC GCACCGGCTG GCGCGGTGAA ATGCGCTTCG GCCTGCTGAA CGATGTGCGC AAGCTGGACA AGGCCCGCTA CCCGCTGATG ATCGAGCGCT TCATGGCCCT GGCGTACGCG CCCGGCGCCG AGCTGCCGCA GCCATACCCG CGCCCCAGCC TGCAGATCGA AGCGCAAAGC CGTGACGCCG CCCTGGCCAA GTTCGGCCTG GAACTGGACC GTCCGGTACT GGCGCTGTGC CCTGGCGCCG AGTTTGGCGA AGCCAAGCGC TGGCCGGCAG AGCACTATGC CGCTGTGGCC GATGCGATGA TTCGCCAAGG CTGGCAAGTG TGGCTGTTTG GCTCGAAGAA CGATCACTCG GTCGGTGAGC AGGTCCGCGA CCGGCTGATT CCGGGGTTCC GTGAAGAGTC GTCCAACCTG GCCGGTGAGA CCTCGCTGGC CGAGGCCATC GACCTGATGT CCTGCGCCCA TGCCGTGGTG TCCAACGATT CCGGCCTGAT GCACGTGGCC GCTGCGCTGA ACCGTCCGTT GGTGGCGGTG TACGGCTCGA CTTCCCCCGG CTTCACCCCA CCGTTGGCCG AACAGGTGGA AGTGGTGCGC ACCGGTATCG AGTGCAGCCC GTGCTTTGAC CGCACCTGTC GCTTCGGCCA TTACAATTGC CTGCGTCTGC TGGAACCGGG CAAAGTGATT GCCGCCCTGC ACAGCCTCAG CGGACCGGAC CTGATCGATA CCGTGGCCGA GGTCGACTAA
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Protein sequence | MRILIIGPSW VGDMVMAQTL FQCLKQQHPD CVIDVLAPEW SRPILERMPE VRQALSFPLG HGALELATRR RIGKSLAGQY DQAILLPNSL KSALVPFFAG IPKRTGWRGE MRFGLLNDVR KLDKARYPLM IERFMALAYA PGAELPQPYP RPSLQIEAQS RDAALAKFGL ELDRPVLALC PGAEFGEAKR WPAEHYAAVA DAMIRQGWQV WLFGSKNDHS VGEQVRDRLI PGFREESSNL AGETSLAEAI DLMSCAHAVV SNDSGLMHVA AALNRPLVAV YGSTSPGFTP PLAEQVEVVR TGIECSPCFD RTCRFGHYNC LRLLEPGKVI AALHSLSGPD LIDTVAEVD
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