Gene Pput_0331 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_0331 
Symbol 
ID5191364 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp375278 
End bp377338 
Gene Length2061 bp 
Protein Length686 aa 
Translation table11 
GC content62% 
IMG OID640584777 
ProductNADH:flavin oxidoreductase/NADH oxidase 
Protein accessionYP_001265688 
Protein GI148545586 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0907336 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.733781 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATTCG AAGCAATGTT CCAGCCGATC CAGATCGGCA AACTGACCAT CCGCAACCGT 
GTGCTCAGCA CCGCGCACGC CGAGGTCTAC GCCACTGACG GCGGCATGAC GACCGACCGC
TATGTGAAGT ACTACGAAGA GAAGGCCAAG GGCGGCATCG GCCTGGCCAT CTGTGGCGGC
TCGTCGGTGG TTGCCATCGA CAGCCCGCAG GAATGGTGGG CATCGGTCAA CTTGTCGACC
GACCGCATCA TCCCGCACTT CCAGAACCTT GCCGACGCCA TGCACAAGCA TGGCGCCAAG
ATCATGATCC AGATTACCCA CATGGGCCGC CGCTCGCGCT GGGACGGCTT CAACTGGCCG
ACGCTGATGT CGCCATCGGG CATTCGCGAA CCTGTGCACC GCGCCACCTG CAAAACCATC
GAGGTGGAAG AGATCTGGCG GGTAATCGGC AACTACGCGC AGGCTGCGCG TCGCGCCAAA
GAGGGCGGCC TGGACGGCGT GGAATTGTCG GCGGTGCACC AGCACATGAT CGACCAGTTC
TGGAGCCCAC GGGTCAACAA ACGTACCGAC GAATGGGGCG GTACCTTTGA AGGCCGCATG
AAATTCGGCC TGGAAGTACT GAAAGCTGTG CGCGCCGAAG TGGGTGACGA CTTCTGCGTG
GGCATGCGTA TCTGTGGTGA CGAGTTCCAC CCTGATGGCC TCAGCCACGA GGACATGAAG
CAGATCGCTG CCTACTACGA CGCCACCGGC ATGCTCGACT TCATCGGCGT GGTCGGCTCG
GGTTGCGATA CCCACAACAC CTTGGCCAAC GTCATCCCCA ACATGAGCTA CCCGCCGGAG
CCGTTCCTGC ACCTGGCGGC CGGTATCAAG GAAGTGGTCA AGGTCCCGGT GCTGCACGCG
CAAAACATCA AAGACCCGAA CCAGGCCACG CGCATCCTTG AAGGCGGCTA CGTGGACATG
GTTGGCATGA CCCGTGCGCA CATGGCCGAC CCGCACCTGA TCGCCAAGAT CAAGATGGGC
CAGATCGACC AGATCAAGCA GTGCGTCGGT GCCAACTACT GCATCGACCG CCAGTACCAG
GGCCTGGATG TGCTGTGCAT CCAGAACGCC GCGACCTCCC GTGAGTACAT GGGTGTGCCG
CACATCATCG AGAAGACCAC CGGCGTCAAG CGCAAGGTGG TGGTGGTTGG CGCAGGCCCT
GCCGGCATGG AAGCGGCCCG CGTGGCTGCT GAACGCGGCC ACGACGTGAC CCTGTTCGAG
AAGAGGGACC AGATTGGCGG GCAGATCACC ATTGCCGCCA AGGCCCCGCA GCGTGACCAG
ATTGCCGGTA TCACCCGCTG GTACCAGCTT GAGCTGGCTC GCCTGAAAGT TGACTTGCGC
CTGGGCACTG CCGCTGATGT GGCGGCGATC CAGGACCTGC GCCCGGACGT CATCGTGCTG
GCCGTAGGTG GGCACTCGTT CCTGGAGCAG AACGAGCACT GGGGTGCCGC TGAAGGGCTG
GTGGTCAGCA GCTGGGATGT GCTCGATGGC AAGGTAGCGC CGGGCAAGAA CGTGCTGGTG
TACGACACCA TCTGCGAATT CACCGGTATG TCGGTCGCCG ACTTCATCGC TGACAAGGGC
AGCCAGGTCG AGATCGTCAC CGACGACATC AAGCCAGGCG TGGCCATGGG GGGGACCACC
TTCCCCACCT ACTACCGCAG CATGTACCCC AAAGAAGTGA TCATGACCGG CGACATGATG
CTGGAAAAGG TCTACCGCGA GGGCGACAAG CTGGTGGCGG TACTGGAGAA CGAATACACC
GGCGCCAAGG AAGAGCGTGT GGTCGATCAA GTCGTGGTTG AAAACGGCGT GCGCCCTGAC
GAAGAGCTGT ACTACGCGCT CAAGGAAGGT TCGCGCAACA AGGGCCAGAT CGACGTGGAG
GCGCTGTTCG CCATCAAGCC ACAGCCGATC CTCAGCCAGC CGGGCGAAGG CTACCTGCTG
TACCGCATCG GTGACTGCGT GGCCCAGCGC AACGTGCATG CGGCGATCTA CGACGCCTTG
CGCCTGTGCA AGGACTTCTG A
 
Protein sequence
MAFEAMFQPI QIGKLTIRNR VLSTAHAEVY ATDGGMTTDR YVKYYEEKAK GGIGLAICGG 
SSVVAIDSPQ EWWASVNLST DRIIPHFQNL ADAMHKHGAK IMIQITHMGR RSRWDGFNWP
TLMSPSGIRE PVHRATCKTI EVEEIWRVIG NYAQAARRAK EGGLDGVELS AVHQHMIDQF
WSPRVNKRTD EWGGTFEGRM KFGLEVLKAV RAEVGDDFCV GMRICGDEFH PDGLSHEDMK
QIAAYYDATG MLDFIGVVGS GCDTHNTLAN VIPNMSYPPE PFLHLAAGIK EVVKVPVLHA
QNIKDPNQAT RILEGGYVDM VGMTRAHMAD PHLIAKIKMG QIDQIKQCVG ANYCIDRQYQ
GLDVLCIQNA ATSREYMGVP HIIEKTTGVK RKVVVVGAGP AGMEAARVAA ERGHDVTLFE
KRDQIGGQIT IAAKAPQRDQ IAGITRWYQL ELARLKVDLR LGTAADVAAI QDLRPDVIVL
AVGGHSFLEQ NEHWGAAEGL VVSSWDVLDG KVAPGKNVLV YDTICEFTGM SVADFIADKG
SQVEIVTDDI KPGVAMGGTT FPTYYRSMYP KEVIMTGDMM LEKVYREGDK LVAVLENEYT
GAKEERVVDQ VVVENGVRPD EELYYALKEG SRNKGQIDVE ALFAIKPQPI LSQPGEGYLL
YRIGDCVAQR NVHAAIYDAL RLCKDF