| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0317 |
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| Symbol | |
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| ID | 5191625 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 361347 |
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| End bp | 362723 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640584763 |
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| Product | L-serine dehydratase 1 |
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| Protein accession | YP_001265674 |
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| Protein GI | 148545572 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1760] L-serine deaminase |
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| TIGRFAM ID | [TIGR00720] L-serine dehydratase, iron-sulfur-dependent, single chain form |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0491818 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCATCA GCGTGTTCGA CCTGTTCAAG ATCGGTGTCG GGCCCTCCAG CTCCCACACC
GTCGGCCCCA TGCGTGCTGG CGCCCTGTTC GTTCAGGGCC TGCGCGAACG CGGTGAGCTG
GAGCGTGTAA AACGGATCGA AGTGCGCCTG TATGGCTCGC TGTCGGCCAC CGGTATTGGT
CATGGCACCG ACAACGCCAC CATCATGGGC CTGATGGGCG AGTGGCCGGA CGCCATTGAC
CCGACCCAGA TCGTGCCGCG TATCGCTGAC CTGCGCGAAA CCAACACCCT GCAGCTGGAT
AGCCGCTTGC CTGTCGAGTT CGTCTGGGCC CGCGACATGC TGCTGCTGGA CGAGAACTTG
CCGTATCACC CCAACGCCAT GACCCTGATT GCCGAAGGCG AGCAGGGTGA GTTGCACCGC
GACACCTATT ACTCGGTGGG CGGCGGCTTT GTGGTCGATG CAGCCCAAGC CGCCAGCGGT
GTGCTGGATG CTGACCAGAC AGTGTTGCCG TACGACTTCA ACAGCGCCGC CGAACTGCTG
CGCCTGTGCA AGCAAAACGA CCTCAGCGTG TCGCAATTGA TGATGGCCAA CGAGAAGGTC
TGGCGCAGCG AGGAAGACAT CCGCGCTGGC CTGCACAAGC TCTGGGAAGC CATGCAGGAA
TGCGTCAACA ACGGCCTCAA GTACGAGGGC ACGCTACCCG GCGGGCTGAA CGTGCGCCGC
CGTGCCGCCA AGCTGCACCG CAGCCTGCAG GAAATCGGCA AGCCCAACGT GATCGGCTCG
ACCATGAGTG CCATGGAATG GGTCAACCTG TTCGCCTTGG CGGTCAATGA AGAAAACGCC
GCCGGCGGGC GCATGGTGAC CGCGCCTACC AACGGCGCGG CAGGCATCAT CCCGGCGGTG
CTGCATTACT ACATGCGATT CAGCGATGCG GTGGATGAGT CCAGCGTTGT CGATTACTTC
CTGGCTGCCG CCGCTGTGGG CATCCTGTGC AAGAAGAACG CTTCGATCTC CGGTGCCGAA
GTGGGTTGCC AGGGGGAAGT CGGCTCGGCC TGCGCGATGG CCGCAGCGGG GCTTGCCGAA
GTGCTCGGCG CCACCCCGCC ACAGGTTGAG AACGCCGCTG AAATTGCCCT GGAACACAAC
CTTGGCCTGA CCTGCGACCC GGTTGGCGGG TTGGTGCAAG TGCCCTGCAT CGAGCGCAAC
GCGATTGCTG CGGTGAAGGC CATCAACGCG GTGCAGATGG CGTTGCGCGG CGATGGTGAG
CACTTCATTT CCCTCGACCA GGTAATCCGC ACCATGCGCG ATACCGGGGC CGATATGCAC
GACAAGTACA AAGAGACCTC GCGCGGCGGC CTGGCGGTCA GCGCTATCGA GTGCTGA
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| Protein sequence | MAISVFDLFK IGVGPSSSHT VGPMRAGALF VQGLRERGEL ERVKRIEVRL YGSLSATGIG
HGTDNATIMG LMGEWPDAID PTQIVPRIAD LRETNTLQLD SRLPVEFVWA RDMLLLDENL
PYHPNAMTLI AEGEQGELHR DTYYSVGGGF VVDAAQAASG VLDADQTVLP YDFNSAAELL
RLCKQNDLSV SQLMMANEKV WRSEEDIRAG LHKLWEAMQE CVNNGLKYEG TLPGGLNVRR
RAAKLHRSLQ EIGKPNVIGS TMSAMEWVNL FALAVNEENA AGGRMVTAPT NGAAGIIPAV
LHYYMRFSDA VDESSVVDYF LAAAAVGILC KKNASISGAE VGCQGEVGSA CAMAAAGLAE
VLGATPPQVE NAAEIALEHN LGLTCDPVGG LVQVPCIERN AIAAVKAINA VQMALRGDGE
HFISLDQVIR TMRDTGADMH DKYKETSRGG LAVSAIEC
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