Gene Pput_0309 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_0309 
SymbolhisB 
ID5191782 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp354625 
End bp355257 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content58% 
IMG OID640584755 
Productimidazoleglycerol-phosphate dehydratase 
Protein accessionYP_001265666 
Protein GI148545564 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0131] Imidazoleglycerol-phosphate dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.7048 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00641142 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAAACCCT TTTCGCCCAA TGATTTTGCG GAGCTGGTGA TGGTCGAACG TAAGGCTTCC 
GTCGAGCGCA ATACCCTGGA AACCCAGGTC AAGTGCTCGA TCAACCTCGA TGGCAGTGGC
AAGGCCCGAT TCGATATCGG TGTGCCTTTC CTTGAACACA TGCTGGACCA GATCGCCCGC
CATGGGCTGA TCGATCTGGA TATCGAGTGC AAGGGTGACA CGCATATCGA CGATCACCAT
ACCGTCGAAG ACGTCGGCAT CACCCTGGGC ATGGCATTCG CCCAAGCTAT CGGTGACAAG
AAAGGTATCT TCCGCTACGG CCACGCCTAC GTGCCGCTGG ACGAAGCGCT GTCTCGCGTG
GTCATCGACT TCTCTGGCCG CCCAGGCCTG CAGATGCACG TGCCGTATAC CCGTGCAAGC
GTTGGCGGCT TCGATGTCGA CCTGTTCCAG GAGTTTTTCC AGGGCTTCGT CAACCACGCC
CTGGTAACCC TGCACATCGA CAACCTGCGT GGCCACAACA CCCACCACCA GATCGAAACC
GTATTCAAGG CTTTCGGCCG TGCCCTGCGC ATGGCCATCA CCCTCGACGA GCGTATGGCC
GGGCAGATGC CTTCCACCAA AGGGTGCCTG TAA
 
Protein sequence
MKPFSPNDFA ELVMVERKAS VERNTLETQV KCSINLDGSG KARFDIGVPF LEHMLDQIAR 
HGLIDLDIEC KGDTHIDDHH TVEDVGITLG MAFAQAIGDK KGIFRYGHAY VPLDEALSRV
VIDFSGRPGL QMHVPYTRAS VGGFDVDLFQ EFFQGFVNHA LVTLHIDNLR GHNTHHQIET
VFKAFGRALR MAITLDERMA GQMPSTKGCL