Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_0309 |
Symbol | hisB |
ID | 5191782 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 354625 |
End bp | 355257 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640584755 |
Product | imidazoleglycerol-phosphate dehydratase |
Protein accession | YP_001265666 |
Protein GI | 148545564 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0131] Imidazoleglycerol-phosphate dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.7048 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.00641142 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAAACCCT TTTCGCCCAA TGATTTTGCG GAGCTGGTGA TGGTCGAACG TAAGGCTTCC GTCGAGCGCA ATACCCTGGA AACCCAGGTC AAGTGCTCGA TCAACCTCGA TGGCAGTGGC AAGGCCCGAT TCGATATCGG TGTGCCTTTC CTTGAACACA TGCTGGACCA GATCGCCCGC CATGGGCTGA TCGATCTGGA TATCGAGTGC AAGGGTGACA CGCATATCGA CGATCACCAT ACCGTCGAAG ACGTCGGCAT CACCCTGGGC ATGGCATTCG CCCAAGCTAT CGGTGACAAG AAAGGTATCT TCCGCTACGG CCACGCCTAC GTGCCGCTGG ACGAAGCGCT GTCTCGCGTG GTCATCGACT TCTCTGGCCG CCCAGGCCTG CAGATGCACG TGCCGTATAC CCGTGCAAGC GTTGGCGGCT TCGATGTCGA CCTGTTCCAG GAGTTTTTCC AGGGCTTCGT CAACCACGCC CTGGTAACCC TGCACATCGA CAACCTGCGT GGCCACAACA CCCACCACCA GATCGAAACC GTATTCAAGG CTTTCGGCCG TGCCCTGCGC ATGGCCATCA CCCTCGACGA GCGTATGGCC GGGCAGATGC CTTCCACCAA AGGGTGCCTG TAA
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Protein sequence | MKPFSPNDFA ELVMVERKAS VERNTLETQV KCSINLDGSG KARFDIGVPF LEHMLDQIAR HGLIDLDIEC KGDTHIDDHH TVEDVGITLG MAFAQAIGDK KGIFRYGHAY VPLDEALSRV VIDFSGRPGL QMHVPYTRAS VGGFDVDLFQ EFFQGFVNHA LVTLHIDNLR GHNTHHQIET VFKAFGRALR MAITLDERMA GQMPSTKGCL
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