| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0308 |
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| Symbol | |
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| ID | 5191781 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 352733 |
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| End bp | 354394 |
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| Gene Length | 1662 bp |
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| Protein Length | 553 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640584754 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001265665 |
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| Protein GI | 148545563 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00531015 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGACCAGTA CCGTCGCGAC GGGAACCTTG GCCAGTGAGC CAGGCTTCCT GTCGAAGGAA
CGCATAATCG CCCGCCCGGG CTTCAACCGC TGGCTGGTCC CGCCAGCTGC CTTGGCCATT
CACCTGTGCA TCGGTATGGC CTACGGCTTC TCGGTATTCT GGCTGCCCTT GTCGCAAGCC
CTGGGGATCA CCGCCCCCGT CGCCTGTGCG GCAGACATGG GCTTCATGGC CCGGATGTTC
AGCGCCGAAT GCGACTGGCC AATCTCGATG CTGAGCTGGA TCTACACCCT GTTCTTCGTC
TTCCTCGGTT GCTCGGCGGC GGTGCTGGGC GGCTGGCTGG AGCACGCCGG CCCGCGCAAG
GCTGGCCTGG TGTCGGCCTT GTGCTGGTGC GGTGGCATGC TGCTTTCGGC GATAGGTGTG
AAAACCCATC AATTGTGGCT GATGTGGCTT GGCTCCGGCG TGATTGGCGG TATCGGCCTG
GGCCTGGGCT ACATCTCACC CGTGTCGACC TTGATCAAGT GGTTCCCGGA CAAACGCGGT
ATGGCCACCG GTATGGCGAT CATGGGCTTC GGCGGCGGGG CCATGGTCGG GGCGCCGCTG
GCCACCGCGC TTATGGGGCA TTTTGGCAAT GAGCACGAAG TTGGCGTATG GCAGAGCTTT
GTCGCCATGG CGGCGATTTA CTTTGTGTTC ATGTCCGCTG GCGCCCTGGC GTATCGCGTA
CCACCGACTG GCTGGAAGCC TGAAGGCTGG GCTGCGCCGT TGAAGAATGC CGGTAACGCC
ATGGTCACCG ACCGCCACGT GCACGTCAGT GTGGCCTGGA AGACCCCGCA GTTCGCGCTG
ATCTGGCTGG TGCTGTGCCT GAACGTGTCG GCGGGCATCG GCATTTTGGG CATGGCGTCA
CCGCTGCTGC AGGAAGTGTT CGCCGGTAAA TTACTGGGCA ACGAACTGAC CTTCAGCCAG
CTGAGCACTG CGCAGTTGGC GCAGATTGCC GCGATCGCCG CCGGCTTTAC CGGCCTGCTG
AGCCTGTTCA ACATTGGCGG CCGGTTCTTC TGGGCATCGT TCTCCGACTA CATCGGCCGC
AAGAACACCT ACTTTGCCTT CTTCGCCTTG GGTGTGGGCT TGTACAGCCT GGTGCCGAAC
ATGGGGCACC TGGGCAACGT GGCGCTTTTC GTGGCAGCGT TCTGCATCAT CCTGTCGATG
TATGGCGGTG GTTTTGCAAC GGTGCCGGCC TACCTGGCCG ACCTGTTCGG CACGCAGATG
GTGGGTGCCA TCCATGGCCG CCTGCTGACC GCCTGGGCGG CAGCGGGGGT GCTGGGGCCG
GTACTGATCA CCTACCTGCG CGAGTATCAA CTGGCAGCGG GCGTGGAGCG GGCGGCGGCT
TATGACATGA CCTTGTACAT TCTCGCGGGT CTGCTGGTGC TGGGCTTTAT CTGCAATATG
CTGGTGCGCC CGGTGGCCGA CAAACATTTC ATGAGTGATG CCGAACTGGC GGCCGAGCGT
GCGTTGAGCC ATGACAAGGG CGTCGATGGG GCGCGGTCGC TGGAGTGGAA GGCGGCGCCA
GGCAGCCTGC CACTGGTGCT GCTGGCCTGG GCGGTGGTGG TTGTGCCGTT GGCCTGGGGT
GTTTGGGTGA CACTGCAGAA GACTGCTGTC CTGTTCCATT GA
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| Protein sequence | MTSTVATGTL ASEPGFLSKE RIIARPGFNR WLVPPAALAI HLCIGMAYGF SVFWLPLSQA
LGITAPVACA ADMGFMARMF SAECDWPISM LSWIYTLFFV FLGCSAAVLG GWLEHAGPRK
AGLVSALCWC GGMLLSAIGV KTHQLWLMWL GSGVIGGIGL GLGYISPVST LIKWFPDKRG
MATGMAIMGF GGGAMVGAPL ATALMGHFGN EHEVGVWQSF VAMAAIYFVF MSAGALAYRV
PPTGWKPEGW AAPLKNAGNA MVTDRHVHVS VAWKTPQFAL IWLVLCLNVS AGIGILGMAS
PLLQEVFAGK LLGNELTFSQ LSTAQLAQIA AIAAGFTGLL SLFNIGGRFF WASFSDYIGR
KNTYFAFFAL GVGLYSLVPN MGHLGNVALF VAAFCIILSM YGGGFATVPA YLADLFGTQM
VGAIHGRLLT AWAAAGVLGP VLITYLREYQ LAAGVERAAA YDMTLYILAG LLVLGFICNM
LVRPVADKHF MSDAELAAER ALSHDKGVDG ARSLEWKAAP GSLPLVLLAW AVVVVPLAWG
VWVTLQKTAV LFH
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