| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0304 |
|---|
| Symbol | |
|---|
| ID | 5191385 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | - |
|---|
| Start bp | 347569 |
|---|
| End bp | 348549 |
|---|
| Gene Length | 981 bp |
|---|
| Protein Length | 326 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640584749 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001265661 |
|---|
| Protein GI | 148545559 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2326] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.0192287 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAAG AATCACCCCT CCTGCTCCCC GCCCCCAGCG AACCCACCAC CACACCGATC
CGCACACGCC GCACACGCCA GCGCAAGCCG GAGCCGACAA TAACCCGCAT CAGCCAGCAA
CCCGCAGCAC TGGAAGTTGC CACGGCCCCC AAAGGCAGCA ACGAGGACAG CACCTCGGCA
CGCCTGCCGG CCAGCTACCC TTACCGCACC CGCCTGCGCC GCCAGGACTA CGACAAGGCC
AAGCATGCGT TGCAGATCGA GCTGCTGAAG GTACAGAGCT GGGTGAAGGA AACCGGCCAG
CGTGTGGTGA TCCTGTTCGA AGGGCGCGAT GCCGCAGGCA AGGGCGGCAC CATCAAGCGC
TTCATGGAGC ACCTCAACCC ACGCGGTGCG CGCATTGTCG CCCTGGAGAA GCCTTCCGAG
CAGGAGAAAG GCCAGTGGTA CTTCCAGCGC TACATCCAGC ACCTGCCCAC AGAGGGTGAA
ATGGTGTTCT TCGACCGCTC CTGGTACAAC CGTGCCGGGG TCGAGAAGGT GATGGACTTC
TGCACGCCAC TGCAATACCT GGAATTCATG CGTCAGGCGC CAGACCTGGA GCGCATGCTG
TGCAACAGTG GCATCCTGCT GTTCAAGTAC TGGTTTTCGG TGAACCGCGA AGAGCAGTTG
CGACGCTTCA TTTCGCGCCG GGACGACCCG CTCAAGCACT GGAAGCTGTC GCCCATCGAC
ATCAAGTCGC TGGACAAGTG GGAGGACTAC ACTTCGGCCA AAGAGGCGAT GTTCTTCCAT
ACCGATACAG CCGATGCGCC GTGGACGGTG ATCAAGTCCG ATGACAAGAA GCGGGCGCGG
ATCAACTGCA TCCGGCACTT CCTGCATTCG CTGGACTACC CAGGCAAAGA CCCTCGGGTG
GCACATGCAC CCGACCCTCT GCTGGTGGGC CGAGCTTCAC ACGGCTTCGA AGAAGACGAG
ACTCCGCAGC CGGCCACCTG A
|
|---|
| Protein sequence | MSEESPLLLP APSEPTTTPI RTRRTRQRKP EPTITRISQQ PAALEVATAP KGSNEDSTSA
RLPASYPYRT RLRRQDYDKA KHALQIELLK VQSWVKETGQ RVVILFEGRD AAGKGGTIKR
FMEHLNPRGA RIVALEKPSE QEKGQWYFQR YIQHLPTEGE MVFFDRSWYN RAGVEKVMDF
CTPLQYLEFM RQAPDLERML CNSGILLFKY WFSVNREEQL RRFISRRDDP LKHWKLSPID
IKSLDKWEDY TSAKEAMFFH TDTADAPWTV IKSDDKKRAR INCIRHFLHS LDYPGKDPRV
AHAPDPLLVG RASHGFEEDE TPQPAT
|
|---|
| |