Gene Pput_0284 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_0284 
Symbol 
ID5191888 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp328265 
End bp329584 
Gene Length1320 bp 
Protein Length439 aa 
Translation table11 
GC content60% 
IMG OID640584729 
Productouter membrane porin 
Protein accessionYP_001265642 
Protein GI148545540 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.314228 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGAAAA CCAGGATCAG CCTGGTCGCC CTGGCGATGA TCGCCGCGAC CCAGGCTCAG 
GCCAATGACC AGGCTGACAG CAAGGGCTTC ATCGAGGACA GTCACGCCAA CGTCCTTCTG
CGCAACGCCT ACATCAACCG TGACAAGAAG CATGGCACCG ACGACCAGAT CGAATGGGGC
CAGGCGTTCA TCGCCAACTT CTCCTCCGGT TTCACCCAGG GCACCGTTGG CGTCGGTGTT
GACGCATTCG GCCTGTACGC CGTGCGCCTG GATGGTGGCA AAGGCCACAA CGGTGGTGGC
GGCGTCGACT TCTTCAAACC GCACGAAACC ACCAATGCCG AAGGCAACGC CAGCTCGCCG
CACAACCTGG CGCGTGGTGG TGCTGCTGTG AAATTCCGCA TTTCCAACAC CGTGCTGAAG
TACGGTGACC AGATGCCAGC ACTGCCAGTG CTGCAGTACG ACGATGCACG TCTGCTGCCA
GAAAGCTTCA CCGGCACCCT GATCACCTCC AAAGAGATCC AGGGCCTGGA ACTGAACGCC
GGCCGCTTCA CCCAGGAAGC GCGCAAGAGC GCCGAGCGCC GTGATGGTGG TGGCCTGAAG
TCGATCAACG TCTTAGGTGG CAGCTACAAG TTCACCGACA ACTTCACCGC TTCGCTGTAC
ACCGCCGACA ACGAAGATGT GATGAAGAAG CACTACCTGG GCTTGAACTA CGTCTTCCCG
ATCGCCAGCG ACCAGTCCCT GACCCTGGAC TTCAACGGCT ACAAGTCGGA CATCAACAAC
AAGTACGTAA AAGCCGCAGG CCTGAACGGC GACTCCAACA CCATCTGGAG CCTTGCAGCC
ACCTACGCGT ACGGTGCGCA CTCGTTCACC CTCGCTCACC AGCGCAGCAC CGGCAGCACT
GGCTACAACT ACGGCTTCTA CCAGAACGCC GGCGGCGTGG GTGACGGTGG TTCCACCATC
TACCTGGCCA ACTCGTACTG GTCCGACTTC AACGCCGAAG ACGAGCGCTC CTGGCAGCTT
GGCTACGGCC TGGACTTCGG TGCCTATGGC ATTCCGGGCC TGACCTACAA GCTGGCCTAC
GTGGTGGGTG ACAACATCAA CACCCGTAAC GTCGCCAACC CGCAAGGCTT CGGCGAAGGT
AAAGAGCGCG AGATCTTCAA CCAGATCCGT TACGTGGTGC AGGACGGCCC GGCCAAGGAC
CTGTCGATCA AGCTGCGTAG CTCGTTCTTG CGTACCAACA ACGCCGTGCA GCAGAACGGT
TACAACGACG ACGGCAACGA AGTCCGCGTA TTCGTCGAGT ACCCGATCAG CATCTTCTGA
 
Protein sequence
MLKTRISLVA LAMIAATQAQ ANDQADSKGF IEDSHANVLL RNAYINRDKK HGTDDQIEWG 
QAFIANFSSG FTQGTVGVGV DAFGLYAVRL DGGKGHNGGG GVDFFKPHET TNAEGNASSP
HNLARGGAAV KFRISNTVLK YGDQMPALPV LQYDDARLLP ESFTGTLITS KEIQGLELNA
GRFTQEARKS AERRDGGGLK SINVLGGSYK FTDNFTASLY TADNEDVMKK HYLGLNYVFP
IASDQSLTLD FNGYKSDINN KYVKAAGLNG DSNTIWSLAA TYAYGAHSFT LAHQRSTGST
GYNYGFYQNA GGVGDGGSTI YLANSYWSDF NAEDERSWQL GYGLDFGAYG IPGLTYKLAY
VVGDNINTRN VANPQGFGEG KEREIFNQIR YVVQDGPAKD LSIKLRSSFL RTNNAVQQNG
YNDDGNEVRV FVEYPISIF