Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_0273 |
Symbol | |
ID | 5190294 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 316810 |
End bp | 317250 |
Gene Length | 441 bp |
Protein Length | 146 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640584718 |
Product | LysM domain/BON superfamily protein |
Protein accession | YP_001265631 |
Protein GI | 148545529 |
COG category | [S] Function unknown |
COG ID | [COG1652] Uncharacterized protein containing LysM domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCTGT TCAGTTTCGT GAAGGAAGCC GGCGAGAAGT TGATCGACCT GCTGACCCCT GGCAACGCCA ATGCCGAAGA GCAGCTTAAG AAACACGTGG AAGCTGTTGG CCTGGGCAAC CCCAACATCA CCGCCACTGT AGAAGGAGAC AAGATCATCC TCAAGGGTGA AGTGGCCAGC CAGGAAGAGA AGGAGAAGAT CATCCTGGCG GCGGGCAACA TCAGCGGCGT GGCCAGTGTC GAGGACCAGA TCACCGTGAC CGGGCCGGTA GTCCAGGCGG CAAGGTTCGT CACAGTGAAA TCGGGCGACA CACTTTCAGC CATTGCCATG GTCGTGTATG GCAATGCCAA TCAGTACAAC AAGATTTTCG AGGCCAACAA GCCGATGCTC AAGCACCCGG ACAAGATCTA TCCGGGGCAG GTGCTGCGTA TTCCTGACTG A
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Protein sequence | MSLFSFVKEA GEKLIDLLTP GNANAEEQLK KHVEAVGLGN PNITATVEGD KIILKGEVAS QEEKEKIILA AGNISGVASV EDQITVTGPV VQAARFVTVK SGDTLSAIAM VVYGNANQYN KIFEANKPML KHPDKIYPGQ VLRIPD
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