Gene Pput_0273 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_0273 
Symbol 
ID5190294 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp316810 
End bp317250 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content56% 
IMG OID640584718 
ProductLysM domain/BON superfamily protein 
Protein accessionYP_001265631 
Protein GI148545529 
COG category[S] Function unknown 
COG ID[COG1652] Uncharacterized protein containing LysM domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTGT TCAGTTTCGT GAAGGAAGCC GGCGAGAAGT TGATCGACCT GCTGACCCCT 
GGCAACGCCA ATGCCGAAGA GCAGCTTAAG AAACACGTGG AAGCTGTTGG CCTGGGCAAC
CCCAACATCA CCGCCACTGT AGAAGGAGAC AAGATCATCC TCAAGGGTGA AGTGGCCAGC
CAGGAAGAGA AGGAGAAGAT CATCCTGGCG GCGGGCAACA TCAGCGGCGT GGCCAGTGTC
GAGGACCAGA TCACCGTGAC CGGGCCGGTA GTCCAGGCGG CAAGGTTCGT CACAGTGAAA
TCGGGCGACA CACTTTCAGC CATTGCCATG GTCGTGTATG GCAATGCCAA TCAGTACAAC
AAGATTTTCG AGGCCAACAA GCCGATGCTC AAGCACCCGG ACAAGATCTA TCCGGGGCAG
GTGCTGCGTA TTCCTGACTG A
 
Protein sequence
MSLFSFVKEA GEKLIDLLTP GNANAEEQLK KHVEAVGLGN PNITATVEGD KIILKGEVAS 
QEEKEKIILA AGNISGVASV EDQITVTGPV VQAARFVTVK SGDTLSAIAM VVYGNANQYN
KIFEANKPML KHPDKIYPGQ VLRIPD