Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_0263 |
Symbol | |
ID | 5193639 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 306537 |
End bp | 307442 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640584708 |
Product | alpha-L-glutamate ligase |
Protein accession | YP_001265621 |
Protein GI | 148545519 |
COG category | [H] Coenzyme transport and metabolism [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0189] Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) |
TIGRFAM ID | [TIGR00768] alpha-L-glutamate ligases, RimK family |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.553998 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGATCG CTGTGCTGTC GCGCAATCCG CGTCTGTATT CCACCCGCCG CCTGGTCGAA GCCGGTACCC AGCGTGGCCA CGAAATGGTG GTGATCGATA CCCTGCGGGC CTACATGAAC ATTGCCAGCC ACAAGCCGCA GATCCACTAC CGCGGCAAGC CGCTGGAAGG CTTCGATGCC GTGATCCCGC GCATAGGTGC TTCGGTTACG TTCTATGGCT GCGCGGTGCT GCGCCAGTTC GAAATGATGG GCGTCTACCC GCTCAACGAG TCGGTAGCCA TTGCCCGCTC GCGCGACAAG CTGCGCTCGT TGCAGCTGTT GTCGCGGCGC GGCATAGGCC TGCCGATCAC CGGTTTCGCC CACTCGCCGG ACGACATCCC CGACTTGATC CAGATGGTCA ACGGTGCCCC GCTGGTGATC AAGGTACTGG AAGGCACCCA GGGCATTGGC GTGGTGCTGT GCGAAACGCC CCAGGCGGCC GAGTCGGTGA TCGAAGCGTT CATGGGCCTC AAGCAGAACA TCATGGTGCA GGAGTACATC AAGGAGGCCG GTGGCGCAGA TATCCGATGC TTCGTGGTAG GCGACAAAGT AATTGCCTCG ATGAAGCGTC AGGCCAAACC GGGCGAGTTC CGCTCCAACC TGCACCGGGG TGGCGTCGCC AGCCTGATAA AAATCACCCC AGAAGAGCGC ATCACCGCCA TTCGGGCGGC CAAGGTAATG GGGTTGAGCG TGGCGGGTGT GGATATCCTG CGTTCCAACC ACGGGCCGTT GGTGATGGAG GTAAACTCGT CGCCAGGGCT GGAGGGCATC GAAGTCACCA CCGGCAAGAA CGTCGCCGGG ATGATCATCG AGCACCTGGA GAAGAATGGC GGGCCCAATC AGACCCGGAC CAAGGGCAAA GGCTGA
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Protein sequence | MKIAVLSRNP RLYSTRRLVE AGTQRGHEMV VIDTLRAYMN IASHKPQIHY RGKPLEGFDA VIPRIGASVT FYGCAVLRQF EMMGVYPLNE SVAIARSRDK LRSLQLLSRR GIGLPITGFA HSPDDIPDLI QMVNGAPLVI KVLEGTQGIG VVLCETPQAA ESVIEAFMGL KQNIMVQEYI KEAGGADIRC FVVGDKVIAS MKRQAKPGEF RSNLHRGGVA SLIKITPEER ITAIRAAKVM GLSVAGVDIL RSNHGPLVME VNSSPGLEGI EVTTGKNVAG MIIEHLEKNG GPNQTRTKGK G
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