Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_0254 |
Symbol | |
ID | 5191602 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 297092 |
End bp | 297889 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640584699 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001265612 |
Protein GI | 148545510 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.293544 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0445843 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTCGTG CAACTTCCTC CAACCTGACC CAGCGCCTGG CGCCGTGGGC GCTGCCGGTG CTGCTGTTGG CAATATGGCA ACTGGCCGTC AGCGCTGGCT GGCTGTCGAC GCGTATCCTG CCGGCACCTA GCGCAGTGGT AAGCGCGGGC GTCGAGCTGG TGCGCAGCGG CGAAATCTGG ACCCACCTGG CCATCAGCGG TTGGCGTGCA GGCCTGGGCT TTGTCATCGG CGGCAGCATC GGCCTGGTAC TGGGCTTCAT CACCGGCTTG TCGAATTGGG GTGAACGCCT GCTCGACAGC TCGGTACAGA TGATCCGCAA CGTGCCGCAC CTTGCGCTCA TACCGCTGGT GATTCTGTGG TTCGGTATCG ACGAGTCGGC AAAGATCTTT CTGGTCGCGC TGGGCACGTT GTTCCCGATC TACCTGAACA CCTACCACGG CATTCGCAAC GTTGACCCAG CGTTGGTGGA AATGGCGCGC AGTTACGGCT TGTCCGGCTT CGGCCTGTTC CGCCAGGTGA TCCTGCCGGG GGCGCTGCCT TCGATCCTGG TGGGCGTGCG TTTCGCCTTG GGCTTCATGT GGCTGACGCT GATTGTTGCC GAAACCATTT CGGCCAACGC TGGCATCGGT TACCTGGCAA TGAATGCTCG CGAATTTCTT CAAACCGACG TGGTAGTGCT GGCCATCGTC CTGTATGCCG TACTCGGCAA GCTTGCCGAC CTTGCGGCCC GGGGCCTGGA GCGCGTGTGG CTGCGCTGGC ACCCGGCCTA TCAAGTTGCC AGGAAGGAGG GCGCATGA
|
Protein sequence | MSRATSSNLT QRLAPWALPV LLLAIWQLAV SAGWLSTRIL PAPSAVVSAG VELVRSGEIW THLAISGWRA GLGFVIGGSI GLVLGFITGL SNWGERLLDS SVQMIRNVPH LALIPLVILW FGIDESAKIF LVALGTLFPI YLNTYHGIRN VDPALVEMAR SYGLSGFGLF RQVILPGALP SILVGVRFAL GFMWLTLIVA ETISANAGIG YLAMNAREFL QTDVVVLAIV LYAVLGKLAD LAARGLERVW LRWHPAYQVA RKEGA
|
| |