Gene Pput_0254 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_0254 
Symbol 
ID5191602 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp297092 
End bp297889 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content63% 
IMG OID640584699 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001265612 
Protein GI148545510 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.293544 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0445843 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCGTG CAACTTCCTC CAACCTGACC CAGCGCCTGG CGCCGTGGGC GCTGCCGGTG 
CTGCTGTTGG CAATATGGCA ACTGGCCGTC AGCGCTGGCT GGCTGTCGAC GCGTATCCTG
CCGGCACCTA GCGCAGTGGT AAGCGCGGGC GTCGAGCTGG TGCGCAGCGG CGAAATCTGG
ACCCACCTGG CCATCAGCGG TTGGCGTGCA GGCCTGGGCT TTGTCATCGG CGGCAGCATC
GGCCTGGTAC TGGGCTTCAT CACCGGCTTG TCGAATTGGG GTGAACGCCT GCTCGACAGC
TCGGTACAGA TGATCCGCAA CGTGCCGCAC CTTGCGCTCA TACCGCTGGT GATTCTGTGG
TTCGGTATCG ACGAGTCGGC AAAGATCTTT CTGGTCGCGC TGGGCACGTT GTTCCCGATC
TACCTGAACA CCTACCACGG CATTCGCAAC GTTGACCCAG CGTTGGTGGA AATGGCGCGC
AGTTACGGCT TGTCCGGCTT CGGCCTGTTC CGCCAGGTGA TCCTGCCGGG GGCGCTGCCT
TCGATCCTGG TGGGCGTGCG TTTCGCCTTG GGCTTCATGT GGCTGACGCT GATTGTTGCC
GAAACCATTT CGGCCAACGC TGGCATCGGT TACCTGGCAA TGAATGCTCG CGAATTTCTT
CAAACCGACG TGGTAGTGCT GGCCATCGTC CTGTATGCCG TACTCGGCAA GCTTGCCGAC
CTTGCGGCCC GGGGCCTGGA GCGCGTGTGG CTGCGCTGGC ACCCGGCCTA TCAAGTTGCC
AGGAAGGAGG GCGCATGA
 
Protein sequence
MSRATSSNLT QRLAPWALPV LLLAIWQLAV SAGWLSTRIL PAPSAVVSAG VELVRSGEIW 
THLAISGWRA GLGFVIGGSI GLVLGFITGL SNWGERLLDS SVQMIRNVPH LALIPLVILW
FGIDESAKIF LVALGTLFPI YLNTYHGIRN VDPALVEMAR SYGLSGFGLF RQVILPGALP
SILVGVRFAL GFMWLTLIVA ETISANAGIG YLAMNAREFL QTDVVVLAIV LYAVLGKLAD
LAARGLERVW LRWHPAYQVA RKEGA