Gene Pput_0242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_0242 
Symbol 
ID5193024 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp283424 
End bp284218 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content59% 
IMG OID640584687 
Productcystine transporter subunit 
Protein accessionYP_001265600 
Protein GI148545498 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.310723 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAAAT TCGCCAAACC GCTACTCAAC GCCAGCCTGG CCCTTCTGCT GGGTGCCGGC 
CTGCTCAGCC AGGCTTTCGC CGGCGAGCAA TTGAAGACCA TTCAGGAAAA AGGCGTCATC
AACGTCGGCC TCGAGGGCAC CTACCCGCCA TTCAGCTTCC AGGACGAAAA CGGCAAACTG
ACCGGCTTCG AAGTGGAGCT GTCTGAGCTG CTGGCCAAGG AGCTGGGGGT CAAGGCCAAG
ATCCAGCCGA CCAAGTGGGA CGGCATCCTC GCCGCGCTGG AATCCAAACG CCTGGATGTA
GTGGTCAATC AGGTGACCAT TTCCGAAGAG CGCAAGAAAA AGTACGACTT CTCCGAGCCC
TACACTGTCT CCGGCATCCA GGCACTGATC CTGAAAAAGA AAGCCGAGCA GCTGAACATC
AAGGGCGCAC AGGACCTGGC CGGCAAAAAG GTCGGCGTAG GCCTTGGCAC CAACTACGAA
CAGTGGGTGA AAAAGGACGT GCCGCAAGCC GATGTGCGCA CCTATGAAGA CGACCCAAGC
AAGTTCGCTG ACCTGCGCAA CGGCCGTATC GACGCCATCC TGATCGACCG CCTGGCGGCG
CTGGAATACG CGCAAAAAGC CAAGGACACC CAACTTGCTG GCGATGCCTT CTCGCGCCTG
GAAAGCGGCG TGGCCCTGCG CAAAGGTGAG CCGGAACTGT TGGCAGCCAT CAACAAGGCC
ATCGACAAGC TAAAAGCTGA CGGCACGCTG GCCAAGCTGT CCGAGAAGTA CTTCGGTGCC
GATGTCACCA AATGA
 
Protein sequence
MSKFAKPLLN ASLALLLGAG LLSQAFAGEQ LKTIQEKGVI NVGLEGTYPP FSFQDENGKL 
TGFEVELSEL LAKELGVKAK IQPTKWDGIL AALESKRLDV VVNQVTISEE RKKKYDFSEP
YTVSGIQALI LKKKAEQLNI KGAQDLAGKK VGVGLGTNYE QWVKKDVPQA DVRTYEDDPS
KFADLRNGRI DAILIDRLAA LEYAQKAKDT QLAGDAFSRL ESGVALRKGE PELLAAINKA
IDKLKADGTL AKLSEKYFGA DVTK