| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0177 |
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| Symbol | |
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| ID | 5193726 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 182152 |
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| End bp | 183333 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640584618 |
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| Product | acyl-CoA dehydrogenase domain-containing protein |
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| Protein accession | YP_001265536 |
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| Protein GI | 148545434 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00130576 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.936713 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGGTA AAGCAAGCTT CAACTGGATC GACCCGTTGC TGCTGGATCA GCAGCTCACT
GAAGAAGAGC GCATGGTGCG TGACAGCGCT TATCAGTTCG CCCAGGACAA GCTGGCCCCG
CGTGTGCTTG AGGCCTTCCG CCATGAGCAG ACCGATCCGG CGATCTTCCG CGAGATGGGT
GAAGTCGGCC TGTTGGGTGC AACCATTCCC GAGCAATACG GTGGCAGTGG CCTGAATTAT
GTGTGCTATG GCCTTATTGC TCGCGAAGTG GAGCGTATCG ACTCAGGTTA CCGCTCGATG
ATGAGTGTGC AGTCGTCACT GGTGATGGTG CCGATCAACG AATTTGGCAC CGAAGCTCAA
AAGCAGAAGT ACCTCCCCAA GCTGGCCAGT GGCGAGTGGA TCGGTTGCTT CGGTCTGACC
GAGCCTAACC ATGGCTCCGA TCCTGGTTCG ATGATTACGC GCGCGAGGAA GGTCGACGGT
GGCTACCGGC TGACCGGCAG TAAAATGTGG ATCACCAACA GTCCTATCGC CGATGTGTTC
GTGGTGTGGG CCAAGGATGA TGCGGGCGAT ATTCGTGGCT TCGTACTGGA AAAAGGCTGG
CAAGGCCTCA GTGCCCCGGC AATCCATGGC AAGGTTGGCC TGCGCGCGTC GATCACTGGT
GAAATCGTCA TGGACAATGT GTTCGTGCCA GAAGAGAACA TCTTCCCGGA CGTGCGTGGC
CTCAAGGGCC CGTTCACCTG CCTGAACTCG GCTCGCTATG GTATTTCTTG GGGGGCGCTG
GGTGCCGCTG AAGCCTGCTG GCACACCGCT CGCCAGTACA CCCTGGACCG TCAGCAGTTT
GGTCGTCCAC TGGCCGCCAA CCAGTTGATT CAGAAGAAGC TTGCCGACAT GCAGACAGAA
ATCACCCTGG CGCTGCAGGG CTGCCTGCGT CTGGGGCGCA TGAAGGATGA AGGGACGGCT
GCGGTGGAAA TCACCTCCAT CATGAAGCGC AATTCCTGCG GCAAGGCGCT GGATATCGCC
CGTATGGCGC GTGACATGCT GGGTGGCAAC GGCATCTCCG ACGAGTTTGG TGTGGCCCGC
CATCTGGTTA ACCTGGAGGT GGTCAACACC TATGAAGGTA CCCATGATGT GCATGCACTT
ATCCTGGGGC GTGCGCAAAC CGGTATCCAG GCGTTCTATT GA
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| Protein sequence | MAGKASFNWI DPLLLDQQLT EEERMVRDSA YQFAQDKLAP RVLEAFRHEQ TDPAIFREMG
EVGLLGATIP EQYGGSGLNY VCYGLIAREV ERIDSGYRSM MSVQSSLVMV PINEFGTEAQ
KQKYLPKLAS GEWIGCFGLT EPNHGSDPGS MITRARKVDG GYRLTGSKMW ITNSPIADVF
VVWAKDDAGD IRGFVLEKGW QGLSAPAIHG KVGLRASITG EIVMDNVFVP EENIFPDVRG
LKGPFTCLNS ARYGISWGAL GAAEACWHTA RQYTLDRQQF GRPLAANQLI QKKLADMQTE
ITLALQGCLR LGRMKDEGTA AVEITSIMKR NSCGKALDIA RMARDMLGGN GISDEFGVAR
HLVNLEVVNT YEGTHDVHAL ILGRAQTGIQ AFY
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