Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_0120 |
Symbol | |
ID | 5192063 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 123479 |
End bp | 125068 |
Gene Length | 1590 bp |
Protein Length | 529 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640584561 |
Product | cytochrome c oxidase, subunit I |
Protein accession | YP_001265479 |
Protein GI | 148545377 |
COG category | [C] Energy production and conversion |
COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
TIGRFAM ID | [TIGR02891] cytochrome c oxidase, subunit I |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGCAG TGATCGACGA CCACGCCCAC GGCCACGACC ATGCGCACGG CCCGGCCAAG GGCCTGATGC GCTGGGTGCT GACCACCAAT CATAAAGACA TCGGCACGAT GTACCTGTGG TTCAGTTTCA TCATGTTCCT GCTCGGTGGC TCGTTTGCCA TGGTGATCCG CGCTGAGCTG TTCCAGCCGG GTTTGCAGAT CGTGGAGCCG GCGTTCTTCA ACCAGATGAC CACCATGCAT GGCCTGATCA TGGTGTTTGG CGCGGTGATG CCGGCCTTCG TCGGCCTGGC CAACTGGATG ATTCCGCTGA TGATCGGCGC GCCCGACATG GCACTGCCAC GGATGAACAA CTTCAGCTTC TGGCTGCTGC CGGCGGCCTT CCTGCTGCTG GTATCGACGC TGTTCAGCCC GGGCGGAGGG CCGAACTTTG GCTGGACGTT CTACGCGCCG CTTTCCACCA CCTATGCGCC AGCCAGCGTC ACCTTCTTCA TCTTCGCCAT CCACCTGATG GGTATCAGCT CGATCATGGG GGCGATCAAC GTGATTGCCA CCATCCTCAA CCTGCGTGCC CCCGGCATGA CGCTGATGAA AATGCCGCTG TTCGTCTGGA CCTGGCTGAT TACCGCGTTC CTGCTGATTG CGGTGATGCC AGTACTGGCC GGCGTGGTAA CCATGATGCT GATGGATATC CACTTCGGTA CCAGCTTTTT CAGTGCCGCA GGTGGCGGTG ACCCGGTGCT GTTCCAGCAT GTGTTCTGGT TCTTCGGTCA CCCTGAGGTG TACATCATGA TCCTGCCCGC CTTCGGTGCG GTCAGCTCGA TCATCCCGGC GTTCTCGCGC AAGCCGCTGT TCGGTTATAC CTCGATGGTG TATGCCACCG GCGCCATTGC CTTCCTGTCA TTCATCGTCT GGGCCCACCA TATGTTCGTG GTCGGCATCC CGGTGGTCGG CGAGTTGTTC TTCATGTACG CCACCATGCT GATTGCCGTG CCCACCGGGG TGAAGGTATT CAACTGGGTC AGCACCATGT GGGAAGGCTC GCTCACCTTC GAAACGCCGA TGCTGTTCGC CATCGCCTTT GTCATCCTGT TCACCATCGG TGGCTTTTCC GGGCTGATGC TGGCGATTGC CCCGGCGGAC TTCCAGTACC ACGACACTTA CTTCGTAGTG GCGCATTTCC ATTACGTACT GGTGCCTGGT GCAATTTTCG GCATCTTTGC CTCGGCCTAC TACTGGCTGC CGAAATGGAC CGGCCACATG TATGACGAAA CCCTCGGCAA ACTGCACTTC TGGCTGTCGT TCATCGGCAT GAACATGGCC TTCTTCCCCA TGCACTTCGT AGGCTTGGCC GGCATGCCAC GGCGCATCCC CGACTACAAC CTGCAGTTCG CCGATTTCAA CATGGTGTCG TCGATCGGCG CGTTCATGTT CGGCGCCACG CAGATCTTCT TCCTGTTCAT TGTCATCAAG TGCATCCGCG GTGGCGCGCC GGCACCGGCC AAACCCTGGG ATGGCGCCGA GGGCCTTGAG TGGTCGATAC CCTCGCCTGC GCCCTACCAC ACCTTCCAGA CACCCCCGGA AGTGAAATAG
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Protein sequence | MSAVIDDHAH GHDHAHGPAK GLMRWVLTTN HKDIGTMYLW FSFIMFLLGG SFAMVIRAEL FQPGLQIVEP AFFNQMTTMH GLIMVFGAVM PAFVGLANWM IPLMIGAPDM ALPRMNNFSF WLLPAAFLLL VSTLFSPGGG PNFGWTFYAP LSTTYAPASV TFFIFAIHLM GISSIMGAIN VIATILNLRA PGMTLMKMPL FVWTWLITAF LLIAVMPVLA GVVTMMLMDI HFGTSFFSAA GGGDPVLFQH VFWFFGHPEV YIMILPAFGA VSSIIPAFSR KPLFGYTSMV YATGAIAFLS FIVWAHHMFV VGIPVVGELF FMYATMLIAV PTGVKVFNWV STMWEGSLTF ETPMLFAIAF VILFTIGGFS GLMLAIAPAD FQYHDTYFVV AHFHYVLVPG AIFGIFASAY YWLPKWTGHM YDETLGKLHF WLSFIGMNMA FFPMHFVGLA GMPRRIPDYN LQFADFNMVS SIGAFMFGAT QIFFLFIVIK CIRGGAPAPA KPWDGAEGLE WSIPSPAPYH TFQTPPEVK
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