Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_0114 |
Symbol | |
ID | 5195217 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 117231 |
End bp | 118289 |
Gene Length | 1059 bp |
Protein Length | 352 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640584555 |
Product | radical SAM domain-containing protein |
Protein accession | YP_001265473 |
Protein GI | 148545371 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1533] DNA repair photolyase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTCCTC CAGCACCGCA AAAGGGCCGT GGCACGGCGC ACAATCCACA CAACCGCTTT GCCCCTGGTC ATTCGGTGGC GGAAGATGAT GGCTGGTATC AGGAAGTGCC GCAAACCCAG GGTACCGAGG TGCGGATCGA GACAGCCAAG TCGGTGATCA GCCGCAACAC TTCACCCGAC CTCCCTTTCG ATCGCTCCAT CAACCCCTAC CGTGGCTGCG AACATGGCTG TATCTACTGC TATGCCCGCC CCTCACACGC CTACTGGGAC CTTTCTCCCG GCCTGGATTT CGAGACCAAA CTGATTGCCA AGACCAACGC CGCCGAGGTG CTGGCACAGC AATTGAGCAA ACCGGGCTAC GTGTGCGCGC CGATCAATCT GGGCTCCAAC ACCGACCCGT ACCAGCCGAT TGAGCGGGAA CAGTTACTGA CCCGGCGCTT GCTCGAAGTG TTACTGCGTT TTCGTCACCC GGTGACCATT GTCACCAAGG GTTCACTGGT GCTGCGCGAC CTTGACCTGC TGGCCGAGAT GGCCCGCCAG CGCCTGGCAC GAGTGATGAT CAGCCTGACC ACGCTGGACG ACGGCCTCAA GCGCGTGCTC GAACCCCGAG CGGCCTCACC CGGTGCGAGG TTGAGGGCCA TCCGGGTATT GCGTGAAGCG GGCGTACCGG TGGGTGTTTT GTGTTCGCCG ATGATTCCGA TGATCAACGA CAGTGAGCTG GAACGCCTGT TGGAGGCGGC CAAGGAGGCC GGTGCGCAAA GTGCGGCGTA CATGATGCTG CGCCTGCCGC TGGAGGTGGC GCCGTTGTTT GAGCAGTGGT TGCAGGACCA TTACCCGCAG CGGGCAGCGC ATGTGTTGAG CCTGATCCGC CAGAGCCGTG GTGGCGAGCT GTATGACAGC CGGTTCGGTG TGCGCATGCG TGGTGAAGGG GTGTTTGCCG AGTTGCTGGC GCAGCGCTTT GCCAAGGCAA TGAAACGGCT GGACTTCGAA GGGCGCGAGG CGCAGGCGCT GGATTGCTCG GCGTTCTGCC CGCCGGGTGG GCAGATGGCG CTGTTCTGA
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Protein sequence | MIPPAPQKGR GTAHNPHNRF APGHSVAEDD GWYQEVPQTQ GTEVRIETAK SVISRNTSPD LPFDRSINPY RGCEHGCIYC YARPSHAYWD LSPGLDFETK LIAKTNAAEV LAQQLSKPGY VCAPINLGSN TDPYQPIERE QLLTRRLLEV LLRFRHPVTI VTKGSLVLRD LDLLAEMARQ RLARVMISLT TLDDGLKRVL EPRAASPGAR LRAIRVLREA GVPVGVLCSP MIPMINDSEL ERLLEAAKEA GAQSAAYMML RLPLEVAPLF EQWLQDHYPQ RAAHVLSLIR QSRGGELYDS RFGVRMRGEG VFAELLAQRF AKAMKRLDFE GREAQALDCS AFCPPGGQMA LF
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