Gene Pput_0112 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_0112 
Symbol 
ID5195320 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp114760 
End bp115041 
Gene Length282 bp 
Protein Length93 aa 
Translation table11 
GC content61% 
IMG OID640584553 
Productnucleic acid binding protein 
Protein accessionYP_001265471 
Protein GI148545369 
COG category[R] General function prediction only 
COG ID[COG3529] Predicted nucleic-acid-binding protein containing a Zn-ribbon domain 
TIGRFAM ID[TIGR02443] conserved hypothetical metal-binding protein 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGAGG TAGCTGTGAA CAAGACCAAG AAACGCTTCA TTGCCGGTGC CGTGTGCCCG 
GCGTGCAGCG AGCCCGACAA GCTGATGATG TGGAACGACG ACGGCGTACC GCACCGCGAG
TGCGTAGCTT GCGGCTTTAC CGACACCCTC AACGAGCAGG GCTTGTCGGT GCCGAAGGAA
CTCGGCACCC GGGTCAACCA CCTGGCGCCG AAAGCGGCGC CGGCCAAGGT GCAGACCGTG
CAGTTCTTCC CAAATCCGAA GCTGAAAAAG CCGGCTGAGT AA
 
Protein sequence
MSEVAVNKTK KRFIAGAVCP ACSEPDKLMM WNDDGVPHRE CVACGFTDTL NEQGLSVPKE 
LGTRVNHLAP KAAPAKVQTV QFFPNPKLKK PAE