Gene Pput_0100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_0100 
Symbol 
ID5190582 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp106193 
End bp106516 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content59% 
IMG OID640584541 
Productprotein of unknown function DUF883, ElaB 
Protein accessionYP_001265459 
Protein GI148545357 
COG category[S] Function unknown 
COG ID[COG4575] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACCGCA ACTCGCTGCG TAAAACATCC CTGGAAAGCA TGGAAGCGGA GATCGAGAGC 
CTTCTGAAAA GCTTGGAACA CCTCAAGCAT GATGCGTCGG AAGAGTCCCA GAAGTCGGTG
AAGGCAATCC GCAGCAACGC TGAAAGCGCA CTGCGTCATT CGCGCAGCCT ACTGAGCGAT
GCGTATGAGG AAGTGAAGCA GCGCACTCGC CAGACCGGCA TAGCCACCCG GGACTACGCC
CAGGAGCACC CCTACACCAC CGCCGGTGTG GCCATTGGTG CGCTGGGCCT GCTGGCGGCC
TACCTGATAT GCAAGCGAAA CTAA
 
Protein sequence
MHRNSLRKTS LESMEAEIES LLKSLEHLKH DASEESQKSV KAIRSNAESA LRHSRSLLSD 
AYEEVKQRTR QTGIATRDYA QEHPYTTAGV AIGALGLLAA YLICKRN