| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0097 |
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| Symbol | trpA |
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| ID | 5193104 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 103166 |
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| End bp | 103975 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640584538 |
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| Product | tryptophan synthase subunit alpha |
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| Protein accession | YP_001265456 |
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| Protein GI | 148545354 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0159] Tryptophan synthase alpha chain |
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| TIGRFAM ID | [TIGR00262] tryptophan synthase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCGTC TTGAACAACG CTTCGCCGAG CTGAAGGCCG AAGGCCGCTC GGCACTGGTC
ACCTTCGTCA CAGCTGGCGA CCCGGGCTAC GACGCCTCGC TGCAGATCCT CAAGGGCCTG
CCGGCTGCTG GCGCCGACGT GATCGAGCTG GGCATGCCGT TCACCGACCC GATGGCCGAT
GGCGTGGCCA TTCAGTTGGC CACCCTGCGC GCCCTTGAAG CTGGCCAGAC CTTGGCCAAG
ACCCTGCAGA TGGTTCGCGA ATTCCGTGTG GATAACCAGA CCACGCCGAT CGTGCTGATG
GGCTACTACA ACCCTATCCA CCGCTTTGGC GTGGACACGT TCGTGGCTGA AGCCAAGGCA
GCGGGCGTCG ATGGCCTGAT CATCGTCGAC CTTCCGCCAG AGCACGACGC CGAACTGGCT
ACCCCGGCCC AGGCTGCAGG CATCGACTTC ATCCGCCTGA CCACTCCGAC CACCGACGAC
GCGCGCCTGC CGCGCGTGCT GGAGCGCAGC TCCGGGTTCG TCTACTACGT GTCGGTGGCT
GGTGTAACCG GTGCAGGTTC GGCGACCACC GAGCATGTGA CCGAAGCCAT TGCCCGCCTG
CGCCGGCATA CCGATCTGCC GATCAGCGTT GGCTTCGGCA TTCGCACGCC GGAACAGGCT
GCGAACATTG CCCGCTTGGC GGATGGTGTG GTGGTGGGCT CGGCACTGGT CGACAAGATC
GCCCAGGCCA AAAGCGCCGA TCAGGCGGTG ACCGATGTAT TGAGCCTGTG CTCGGCACTG
GCTGAAGGGG TGCGTGGCGC ACGCCGCTAA
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| Protein sequence | MSRLEQRFAE LKAEGRSALV TFVTAGDPGY DASLQILKGL PAAGADVIEL GMPFTDPMAD
GVAIQLATLR ALEAGQTLAK TLQMVREFRV DNQTTPIVLM GYYNPIHRFG VDTFVAEAKA
AGVDGLIIVD LPPEHDAELA TPAQAAGIDF IRLTTPTTDD ARLPRVLERS SGFVYYVSVA
GVTGAGSATT EHVTEAIARL RRHTDLPISV GFGIRTPEQA ANIARLADGV VVGSALVDKI
AQAKSADQAV TDVLSLCSAL AEGVRGARR
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