Gene Pput_0087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_0087 
Symbol 
ID5193909 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp93301 
End bp93618 
Gene Length318 bp 
Protein Length105 aa 
Translation table11 
GC content58% 
IMG OID640584528 
Producthypothetical protein 
Protein accessionYP_001265446 
Protein GI148545344 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.585828 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAAGA AAATAGTCCC CGATCCACCT CTCCCATGCA CCTCCACCCG CCCCTTCGGC 
CGCTGCGATG CCGGCCACGA TCCACTCTTC ACCGTCAACC CAAACATTTC TGCCGAGGAC
GCTCTGGTCC ACGTAGCCCT GTACCTGCGC AGCGCTTACG AAACCGGCTA CAAAGCTTTG
GACTACATGC GTGAAGAAGG CCGTGGCATG TTCTGGTCGA ACCTGCATGC GATTGAGATG
GCAGAGGGTG TGATCGAGGC GATACTCGAT GGCATCGAGT CGACTCCACC GCTGACAAAC
CGACCCTCAC AGGCATAG
 
Protein sequence
MMKKIVPDPP LPCTSTRPFG RCDAGHDPLF TVNPNISAED ALVHVALYLR SAYETGYKAL 
DYMREEGRGM FWSNLHAIEM AEGVIEAILD GIESTPPLTN RPSQA