| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0086 |
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| Symbol | |
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| ID | 5193908 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 92364 |
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| End bp | 92921 |
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| Gene Length | 558 bp |
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| Protein Length | 185 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640584527 |
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| Product | SUA5/yciO/yrdC domain-containing protein |
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| Protein accession | YP_001265445 |
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| Protein GI | 148545343 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0009] Putative translation factor (SUA5) |
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| TIGRFAM ID | [TIGR00057] Sua5/YciO/YrdC/YwlC family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.592452 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGTGAGCA GTTTTCGTGT GCAACAAGCC GCACGTGAGA TCCGGGCGGG CGCGGTGATC
GCCTACCCGA CGGAAGCGGT CTGGGGCCTG GGCTGCGACC CATGGAACGA GGACGCGGTG
TATCGCCTGC TGGCGCTGAA GTCGCGTCCT GTGGATAAAG GGCTGATTCT GATCGCTGAC
AATATCCGTC AGTTCGACTT CCTGTTCGAG GACTTCCCCG AGGACTGGAT CGACCGCATG
GGCAGCACCT GGCCGGGGCC GAACACCTGG CTGGTGCCGC ACCAGGACCT GTTGCCCGAG
TGGGTGACCG GGCAGCATGA CACGGTGGCG CTGCGGGTCA GTGATCACCC GGTGGTGCGT
GAGCTGTGCG CGCTGGTGGG GCCGCTGATT TCCACCTCGT GCAACCCTGG CGGGCGCCCG
GCGGCGAAGA CCCGCTTGCG GGTTGAGCAG TACTTCCATG GCCAGTTGGA CCTGGTGCTT
GGCGGGGCGC TGGGCGGGCG GAAGAACCCG AGTGTGATTC GCAACCTGGC AACCGGCGAA
GTCGTTCGCC CGGGGTGA
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| Protein sequence | MVSSFRVQQA AREIRAGAVI AYPTEAVWGL GCDPWNEDAV YRLLALKSRP VDKGLILIAD
NIRQFDFLFE DFPEDWIDRM GSTWPGPNTW LVPHQDLLPE WVTGQHDTVA LRVSDHPVVR
ELCALVGPLI STSCNPGGRP AAKTRLRVEQ YFHGQLDLVL GGALGGRKNP SVIRNLATGE
VVRPG
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