| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0085 |
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| Symbol | |
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| ID | 5193907 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 91224 |
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| End bp | 92321 |
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| Gene Length | 1098 bp |
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| Protein Length | 365 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640584526 |
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| Product | DNA protecting protein DprA |
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| Protein accession | YP_001265444 |
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| Protein GI | 148545342 |
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| COG category | [L] Replication, recombination and repair
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0758] Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake |
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| TIGRFAM ID | [TIGR00732] DNA protecting protein DprA |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.273214 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.48909 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAGTT ACCATTCGTC GCTCTGCCCG CCTGCTGAAC TGGAGGCCCG ATTACGCCTG
CATCGCTTGC CCGAGACAGG ATTGCGACGT TTTCGCACCT TGCTGGATGC GTTCGGCAGC
GCCTCTAGTG CGCTTAGCGC TCCCGGTTCG GCCTGGCGAG CGTTGGGCAT CCCCCAAGCC
ACCATCGATG CCCGGCGCAG TGCCGAGGTA CGCGAGGGCG CGCTCGCCGC AATGGCCTGG
TTAGAGCGCC CTGGCCAGCA TTTGCTGATG TGGGACGGCC CAGACTACCC AGCCTTGCTG
GCAGAAATCG ACGATGCTCC GCCGCTGCTT TTTGTCGCTG GCGAACCTGC CTTGCTCGAT
CGTCCTCAGC TGGCGATCGT GGGCAGCAGA CGTGCCACAC CCCCGGCGCT CGACACCGCC
CGGGCATTTT CCCGCTACCT CGCGCAGGCT GGTTTCACCA TTACCAGCGG GCTGGCGGTA
GGTGTCGACG GTGCCGCTCA TCGGGCCGCG TTGCAGGCCG GTGGGTGCAC GATTGCCGTA
CTCGGTACGG GGCTGCAAAA ACTTTATCCA CAGCGCCATC AAGAGCTTGC GCAGGCGATG
ATCGACAACG GCAGTGCGCT GGTTTCCGAG TATCCGCTGG ACGCCGGGCC ACTGCCCGGC
AACTTCCCAC GGCGCAACCG CATCATCAGT GGCCTGTCGC TAGGTGTACT GGTGGTTGAG
GCGAGCCTCG CCAGTGGCTC GCTGATCACG GCGCGCCTGG CCGCAGAGCA AGGCCGTGAG
GTGTACGCCA TTCCGGGCTC CATTCATCAC CCGGGGGCCA AGGGCTGCCA CCAGCTGATT
CGTGATGGGG CGCTGCTGGT GGAAACTGTG GAGCAGATCC TGGAAAGCTT GCAGGGCTGG
CAGAACCTGC CGCCTGCGGT TGTGGACAGG TTCGACCACC CCCTGCTCGC CCTGCTGCAT
GCCGCACCCC AGACCAGTGA AAGCCTGGCC CACTGCAGCG AGCAGCCGCT GGCCGACGTG
CTGGCGCAGT TGACCGAGCT GGAGCTGGAA GGCCGGGTCA GCAATGAAGC CGGGCGTTGG
TTTGCCCGCG CGGGCTAA
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| Protein sequence | MPSYHSSLCP PAELEARLRL HRLPETGLRR FRTLLDAFGS ASSALSAPGS AWRALGIPQA
TIDARRSAEV REGALAAMAW LERPGQHLLM WDGPDYPALL AEIDDAPPLL FVAGEPALLD
RPQLAIVGSR RATPPALDTA RAFSRYLAQA GFTITSGLAV GVDGAAHRAA LQAGGCTIAV
LGTGLQKLYP QRHQELAQAM IDNGSALVSE YPLDAGPLPG NFPRRNRIIS GLSLGVLVVE
ASLASGSLIT ARLAAEQGRE VYAIPGSIHH PGAKGCHQLI RDGALLVETV EQILESLQGW
QNLPPAVVDR FDHPLLALLH AAPQTSESLA HCSEQPLADV LAQLTELELE GRVSNEAGRW
FARAG
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