Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_0083 |
Symbol | fmt |
ID | 5195176 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 89518 |
End bp | 90450 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640584524 |
Product | methionyl-tRNA formyltransferase |
Protein accession | YP_001265442 |
Protein GI | 148545340 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0223] Methionyl-tRNA formyltransferase |
TIGRFAM ID | [TIGR00460] methionyl-tRNA formyltransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.217446 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGCATCG TCTTTGCAGG CACTCCAGAG TTTGCCGCCG AACACCTCAA GGCCCTGCTC GACAGCCCCT ACGAGATCGT GGCCGTCTAC ACCCAGCCCG ACCGCCCGGC CGGCCGTGGC CAAAAGCTGA TGCCAAGTGC GGTCAAGGCA CTGGCCGTGG CCCATGACAT CCCGGTGTTC CAGCCGCAGA CCCTGCGCAA TGCCGATGCG CAGGCCGAAC TGGCCGCACT GAAACCAGAC CTGATGGTAG TGGTCGCCTA CGGCCTGATC CTGCCGCAGG TGGTGCTGGA TATCCCGCGC CTGGGTTGCA TCAACAGCCA CGCTTCCCTG CTGCCACGCT GGCGCGGTGC CGCGCCGATC CAGCGTGCCG TGGAAGCCGG CGACGCCGAA AGCGGCGTGA CCGTGATGCG CATGGAGGCC GGCCTGGACA CCGGGCCGAT GCTGCTCAAG GTCGTCACCC CGATCAGCGC CGAGGACACC GGCGGCACCT TGCACGATCG CCTGGCCGAA ATGGGCCCGC CCGCAGTCGT TCAGGCCATC GCCGGCCTGG CTGACGGTTC GCTGCAAGGC GAAATACAGG ACGATGCCCT GGCCACCTAC GCGCACAAAC TGAACAAGGA CGAAGCGCGT ATCGACTGGA CCCGCCCGGC CGTCGAGCTG GAACGCCTGA TCCGCGCCTT CAACCCATGG CCGGTGTGCC ACAGCATGCT GGACGGTGAA AGCGTCAAGG TGCTGGCCGC CAACCTGTCC ACAGGCCAAG GCGCCCCGGG CGAGATACTT TCCGCCAGCA AGGACGGCCT CGTAGTTGCG TGCGGTGACC AAGCCCTGAG CCTGACCCGC CTGCAACTGC CTGGCGGCAA GGCATTGAGC TTCAGTGACC TGTTCAACAG CCGCCGCGAG AAGTTCGCCG CCGGCAAGGT GCTGGGCCAA TGA
|
Protein sequence | MRIVFAGTPE FAAEHLKALL DSPYEIVAVY TQPDRPAGRG QKLMPSAVKA LAVAHDIPVF QPQTLRNADA QAELAALKPD LMVVVAYGLI LPQVVLDIPR LGCINSHASL LPRWRGAAPI QRAVEAGDAE SGVTVMRMEA GLDTGPMLLK VVTPISAEDT GGTLHDRLAE MGPPAVVQAI AGLADGSLQG EIQDDALATY AHKLNKDEAR IDWTRPAVEL ERLIRAFNPW PVCHSMLDGE SVKVLAANLS TGQGAPGEIL SASKDGLVVA CGDQALSLTR LQLPGGKALS FSDLFNSRRE KFAAGKVLGQ
|
| |