| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0076 |
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| Symbol | glyS |
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| ID | 5191167 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 81828 |
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| End bp | 83882 |
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| Gene Length | 2055 bp |
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| Protein Length | 684 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640584517 |
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| Product | glycyl-tRNA synthetase subunit beta |
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| Protein accession | YP_001265435 |
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| Protein GI | 148545333 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0751] Glycyl-tRNA synthetase, beta subunit |
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| TIGRFAM ID | [TIGR00211] glycyl-tRNA synthetase, tetrameric type, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000133889 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.112381 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGCTC AAGATTTTCT GGTAGAACTG GGCACCGAAG AGCTGCCACC CAAGGCCCTC
ACCAGCCTCG GCGAAGCTTT CCTGGCCGGT ATCGAAAAAG GCCTGCAGGC CGCTGGCCTG
AACTACACCG GCAAGCAGGT GTACGCCGCG CCGCGTCGTC TGGCCGTGCT GATTCGCCAG
CTGGACGTGC AGCAGCCTGA CCGCAGCATC AACATCGACG GCCCGCCCCT GCAGGCAGCT
TTCAACGCCG AAGGCGAGCC GACCCAGGCT GCGCTGGGCT TCGCCAAGAA GTGCGGTGTG
GAACTGGCCG AAATCGACCA GAGCGGCCCC AAGCTGCGCT TCTCCCAGCA CATCCCGGGC
AAGGCCACCA CTGACCTGCT GCCGACCATC GTCGAAGATT CGCTGAACGA CCTGCCGATC
CCCAAGCGCA TGCGCTGGGC GGCCAGCCGT GAAGAGTTCG TGCGCCCAAC CCAATGGCTG
GTAATGCTGC TGGGCGACCA GGTGGTCGAC TGCACCATTC TGTCGCAGAA GGCCGGCCGT
GAATCCCGTG GCCACCGCTT CCATCATCCG GAAACCGTGG TCATCACTAC CCCGGCCAAC
TATGTCGAAG ACCTGCGTAA AGCTCACGTG CTGGCCGACT TCGCCGAACG CCGCGAGCTG
ATCAGCAAGC GTACCGCCGA GCTTGCCATG CAGCAGGAAG GCACTGCCAT CGTGCCGCCG
GCGCTGCTGG ACGAAGTGAC TGCTCTGGTC GAATGGCCAG TGCCGCTGGT GTGCTCGTTC
GAAGAGCGTT TCCTCGAGGT GCCGCAGGAA GCCCTGATCA CCACCATGCA GGACAACCAG
AAGTACTTCT GCCTGCTGGA CAGCGAAGGC AAGCTGCTGC CGCGCTTCAT CACCGTGGCC
AACATCGAGA GCCGCGACCC GAAGCAGATC GTGCAAGGCA ACGAAAAGGT CGTGCGCCCG
CGCCTGACCG ACGCCGAGTT CTTCTTCAAG CAGGACAAGA AGCAGCCGCT GGAAACCTTC
AACGAGCGCC TCAAGAACGT GGTGTTCCAG GCTCAGCTCG GCACCGTGTA CGACAAGGCG
GAACGTGTTT CCAAGCTGGC CGCCTTCGTT GCCCCGCTGA TCGGCGGCGA CGCCCAGCGC
GCTGGCCGTG CCGGTCTGCT GTCGAAGTGC GACCTGGCCA CCGAGATGGT CGGCGAATTC
CCTGAAATGC AGGGTGTTGC CGGTTACTAC TACGCGCTCA ACGACGGTGA GCCGGAAGAC
GTAGCCCTGG CCCTGAACGA GCAGTACATG CCGCGCGGTG CTGGTGCCGA GCTGCCGCAG
ACCCTCACCG GTGCTGCCGT GGCCATCGCC GACAAGCTCG ACACCCTGGT GGGCATCTTC
GGCATCGGCA TGCTGCCTAC CGGCAGCAAG GACCCGTACG CCCTGCGCCG TGCGGCTCTG
GGCGTGCTGC GTATTCTGAT CGAGAAGCAA CTGGACCTGG ACCTGACCGG TGCAGTCGAG
TTTGCGGTCA AGCAGTTCGG CGCCAAGGTC AAGGCCCCCG GCCTGGCCGA TCAAGTACTG
GAGTTCATTT TCGACCGCCT GCGCGCGCGT TACGAAGACG AAGGCATCGA CGTGGCCACG
TACCTGTCGG TACGCGCACT GCAGCCAGGC TCCGCCCTGG ACTTCGACCA GCGCGTACAA
GCCGTGCAGG CGTTCCGCAA ACTGCCGGAA GCCGAGGCCC TGGCCGCGGT GAACAAGCGC
GTGTCGAACC TGCTGAGCAA GGCCGAAGGT GCCATCGCCG AGCAGGTCGA GCCGAAGTAC
TTCGACAATG CCAACGAGTT CTCCCTGTAC TCGGCCATCC AGCAGGCCGA CCAGGCCGTG
CAACCGATGG CTGCGGCACG TCAGTACAGC GAATCGCTGG CCCGCCTGGC GGCCCTGCGT
GACCCGGTCG ATGCCTTCTT CGAGGCGGTC ATGGTCAACG CCGAAGACGC CAAGGTACGT
GCCAACCGTT ATGCCCTGCT CAGCCGTCTG CGCGGCCTGT TCCTGGGCGT GGCTGACATT
TCGCTGCTGG GGTAA
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| Protein sequence | MSAQDFLVEL GTEELPPKAL TSLGEAFLAG IEKGLQAAGL NYTGKQVYAA PRRLAVLIRQ
LDVQQPDRSI NIDGPPLQAA FNAEGEPTQA ALGFAKKCGV ELAEIDQSGP KLRFSQHIPG
KATTDLLPTI VEDSLNDLPI PKRMRWAASR EEFVRPTQWL VMLLGDQVVD CTILSQKAGR
ESRGHRFHHP ETVVITTPAN YVEDLRKAHV LADFAERREL ISKRTAELAM QQEGTAIVPP
ALLDEVTALV EWPVPLVCSF EERFLEVPQE ALITTMQDNQ KYFCLLDSEG KLLPRFITVA
NIESRDPKQI VQGNEKVVRP RLTDAEFFFK QDKKQPLETF NERLKNVVFQ AQLGTVYDKA
ERVSKLAAFV APLIGGDAQR AGRAGLLSKC DLATEMVGEF PEMQGVAGYY YALNDGEPED
VALALNEQYM PRGAGAELPQ TLTGAAVAIA DKLDTLVGIF GIGMLPTGSK DPYALRRAAL
GVLRILIEKQ LDLDLTGAVE FAVKQFGAKV KAPGLADQVL EFIFDRLRAR YEDEGIDVAT
YLSVRALQPG SALDFDQRVQ AVQAFRKLPE AEALAAVNKR VSNLLSKAEG AIAEQVEPKY
FDNANEFSLY SAIQQADQAV QPMAAARQYS ESLARLAALR DPVDAFFEAV MVNAEDAKVR
ANRYALLSRL RGLFLGVADI SLLG
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