| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0071 |
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| Symbol | |
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| ID | 5191281 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 75805 |
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| End bp | 76692 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640584512 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001265430 |
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| Protein GI | 148545328 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.328388 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00942011 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTCGACT GGAATGATCT GCGGTTTTTC CTCGAGTTGC AGCGCAGCGG CCGCCTGCTG
ACCGCCGCCA AGCGCCTGAA CACTACCCAC AGCACCGTGG CCCGGCATAT CGAGAGCATC
GAGCAGAGCC TGGGGACCGC GCTGTTCGTG CAGCATGCCC AGGGCTACGA GCTGACCCCC
TCGGGCCAAG CCCTGCTCAA GCATGCCGAA GCCATGGAGA ACGTCGCCTT GCTGGCACAA
GAGGAAATCA CCCAGGCCAT CACCCCGCTG GGCAAGATTC GTCTGGGGGT AACCGAAGGC
ATCGGCATCA TGTTCTTCAC CCCACGCATG AACGCGTTGT TCGAGCGCTA CCCCGGCCTG
GAGGTGGAAC TGGTAGCGGT GCCGCGTTTC GTCAGCATCC TCAACCGCGA GGCAGAAATC
AGCATCCATC TGGAGCGACC CAACGCCGAC CTGCTGATCA CCCGCAAACT CACCGACTAC
CGCTTGGCGC TGTACGCCAG CCAGGACTAC CTGGACCGCG CACCGCCACT GCGCAACCGC
GAAGACTTGG CCCGGCACAG CTGGATCGGC TACGTCGACG ATTTGCTGTT CAGCCAGGAA
CTGCTGTTTC TCAACAGTTT CTGCCGAGCA CCCAACGTGG TGTTTCGCAG CACCAGCGTG
ATCGCCCAGC AAGCCGCCGC CCGCGCCGGG CTGGGCATCG CCGTGCTGCC CAACTACATG
GCCCGCCACG ACCCGACACT GGTGCGCGTG CTGCCGGGAG AAACCATCCA GCGCAGCTAC
TGGATCTGCA CCCGCCGTGA GCTGCACAAG TCTGTGCGCC TGCGGGTGGT GTGGGACTAC
CTGCTGGCGT TGTGCGCGGC CGAACAGAGC GAGTTGCTAG CCGAGTAG
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| Protein sequence | MFDWNDLRFF LELQRSGRLL TAAKRLNTTH STVARHIESI EQSLGTALFV QHAQGYELTP
SGQALLKHAE AMENVALLAQ EEITQAITPL GKIRLGVTEG IGIMFFTPRM NALFERYPGL
EVELVAVPRF VSILNREAEI SIHLERPNAD LLITRKLTDY RLALYASQDY LDRAPPLRNR
EDLARHSWIG YVDDLLFSQE LLFLNSFCRA PNVVFRSTSV IAQQAAARAG LGIAVLPNYM
ARHDPTLVRV LPGETIQRSY WICTRRELHK SVRLRVVWDY LLALCAAEQS ELLAE
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