Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_0066 |
Symbol | |
ID | 5192553 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 70754 |
End bp | 71161 |
Gene Length | 408 bp |
Protein Length | 135 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640584507 |
Product | hypothetical protein |
Protein accession | YP_001265425 |
Protein GI | 148545323 |
COG category | [S] Function unknown |
COG ID | [COG5455] Predicted integral membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00326419 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAGAAAG CCCTAACCGT GATCTGCGCC GCGCTCATGC TCAGCACACC GCTGGCAAGC TTCGCGCAAC CGGGCCCGCC TGATCGGCAT GATGGCGGCC CATCGCACCA AGGCAACCCG CCACAGGGTC AACCACAGCA CCAGGGCCGA CATGACAATG GCCGCGGTCC TGCTTACCGT GATCCAAACT TCCACCCACA ACAAGGCATG CCGATACCTC ATAAGCAGTG GCAGCGGGGT CATGCCGTTG ATCCACATTA CCGTGGAGAC CGTTACTGGG TAACTGACTG GAAAGCGCGC CACCTGTATG CGCCACCTCG TGATCATCGT TGGCTGTATG TGAATGGCGA CTATGTGCTG GTGGCCATTG CCAGCGGTGT GATCGTGAAC ATTCTCACCG GCTACTGA
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Protein sequence | MKKALTVICA ALMLSTPLAS FAQPGPPDRH DGGPSHQGNP PQGQPQHQGR HDNGRGPAYR DPNFHPQQGM PIPHKQWQRG HAVDPHYRGD RYWVTDWKAR HLYAPPRDHR WLYVNGDYVL VAIASGVIVN ILTGY
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