Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_0063 |
Symbol | |
ID | 5194865 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 67418 |
End bp | 68029 |
Gene Length | 612 bp |
Protein Length | 203 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640584504 |
Product | hypothetical protein |
Protein accession | YP_001265422 |
Protein GI | 148545320 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.00155352 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGAAGCGTC ACCTCTCTTC GGGTAAAAGC ATGACCGTCA TACAACGCTA CAACAGCGTC ATACCCGAGA GCATAGGAAG AAAAATGTCG ATCCAAGGAC TAAAACGATA CTTTGGAAAC AAGATTCACG CAGTGATAAT GATGGCCCCG CTTAAGCGGG AAATGATACG CCTCGGCATA TGCACCCTTA TGGCGATTAT TCTGAATATC ATCTTGTATA CCGGCGTTGA AGTAGACGGC ACCATCAAGC CGTGGGCAGA AACCCCGATA AAACTGTTTG CATCGTCGAT GTTATTCGCC TTCATGATCA AGGCTTTTCT GCCAGTTCTC GGCTGGACGA TACTGAAAGC AATGCTGTTG AGTGCGAACA ATGCCTTCAG CGGCATACTG AGTTTTTTGG GCAATCAGTT CACAGGCGTC ATGTACTGTA CCGGAATTAT TATGGATTCT ATCACGATTA AATTGTATAT GGTTTCCGGG GTTTTAGACT CTGAGTTTGC TTATCTGTCC GCAATCGTAT TTGCTTCCGG GGTTTTATAT TTCTATGTGC TGCAATGCGC CATTCAAAAA ACAATGAGTC CGGCCCTGCG TACACCAGCA GTACCGCGTT AA
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Protein sequence | MKRHLSSGKS MTVIQRYNSV IPESIGRKMS IQGLKRYFGN KIHAVIMMAP LKREMIRLGI CTLMAIILNI ILYTGVEVDG TIKPWAETPI KLFASSMLFA FMIKAFLPVL GWTILKAMLL SANNAFSGIL SFLGNQFTGV MYCTGIIMDS ITIKLYMVSG VLDSEFAYLS AIVFASGVLY FYVLQCAIQK TMSPALRTPA VPR
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