| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0059 |
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| Symbol | |
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| ID | 5191174 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 62694 |
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| End bp | 63878 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640584500 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_001265418 |
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| Protein GI | 148545316 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00860018 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCGCCTG CAGCCCTTGC CCAAAGCATC AGCTTGCCCC AGGCGCTTTC GACGGCCATG
GATGCCAACC CAGACCTGGC CGCGGCCAGG CAAGAAATTG GGATCGCTGA TGGTGCTCGC
AAGCAGGCCG GGCTTATCCC CAACCCCACA ATCTCGTATG ACGTGGAAGA CACCCGTCGT
AACACCAGCC AGACGACTGT CTCTCTCAGC CAGACCCTTG AGCTGGGCGG TAAGCGGGGG
GCTCGTGTTG ACGTCGCCAC ATACGGGCAG ACCGCCGCAC AGCTTGAGTT AGACCGTCGC
GTTAACGGCC TGCGTGCAGA TGTCGTCCAA GCCTTTTACG CCGCGTTGCG GGCCCAGACA
GGTCTCGACC TGGCCAAGCA ATCTCTCGAA CTGACTGAGC GCGGTCTTCG CATCGTCGAT
GGCCGTGTTC GCGCAGGTAA GTCGTCCCCA GTGGAGGCGA CCCGCGCTCA AGTGCAACTG
GCCGAAGCCC AGCTGCAAGT TCGACGTGCA GAAACGGAAA AAGCGACCGC TTACCAACAG
CTCGCTCAAA TTACCGGGAG CTCAGTCACC GTGTTTGATC GACTCGAATC GCCAACCCTC
TCCCCGGGCT TGCCACCTCG CACTGAAGAT CTGCTGGCTA AGCTCGACCA AACAGCAGAA
ATGCGTCAGG CCGTGGTGCA GATAGACAAG AGCGATGCCT CGCTCGGCTC AGAGAAAGCT
CAGCGTATCC CGAACCTTAC TGTCAGTGTA GGTAGCCAGT ACGACCGCTC TGTGCGCGAG
CGGGTCAACA CTGTGGGCCT GTCTATGCCT TTGCCGCTGT TCGATCGTAA CCAGGGCAAC
ATTCTTTCCG CTTCTCGTCG TGCAGATCAG GCCCGGGACC AGCGCAATGC TGTTGAGCTG
CGCCTGCGCA CCGAAACCCA AACCGCGTTG AACCAATGGT CCACCGCCAT GCAGGAGGTC
GAGTCCTACG ACAAGACCAT TCTGCCTTCA GCCCAACAAG CCGTAGAGAC CGCAACCCGC
GGCTTCGAGA TGGGCAAATT CGGTTTCATC GAAGTGCTGG ATGCCCAGCG CACCTTGATC
GTCGCTCGTG GCCAATACCT CGAATCGTTG GCAGCGGCGA CCAATGCGCG TGCGCAGGTG
GAAAGGGTTT ATGGCGAAGT CGGCTCAACC GCCGGCACTC GCTGA
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| Protein sequence | MAPAALAQSI SLPQALSTAM DANPDLAAAR QEIGIADGAR KQAGLIPNPT ISYDVEDTRR
NTSQTTVSLS QTLELGGKRG ARVDVATYGQ TAAQLELDRR VNGLRADVVQ AFYAALRAQT
GLDLAKQSLE LTERGLRIVD GRVRAGKSSP VEATRAQVQL AEAQLQVRRA ETEKATAYQQ
LAQITGSSVT VFDRLESPTL SPGLPPRTED LLAKLDQTAE MRQAVVQIDK SDASLGSEKA
QRIPNLTVSV GSQYDRSVRE RVNTVGLSMP LPLFDRNQGN ILSASRRADQ ARDQRNAVEL
RLRTETQTAL NQWSTAMQEV ESYDKTILPS AQQAVETATR GFEMGKFGFI EVLDAQRTLI
VARGQYLESL AAATNARAQV ERVYGEVGST AGTR
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