| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0023 |
|---|
| Symbol | |
|---|
| ID | 5191811 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | + |
|---|
| Start bp | 27783 |
|---|
| End bp | 28130 |
|---|
| Gene Length | 348 bp |
|---|
| Protein Length | 115 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640584466 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001265384 |
|---|
| Protein GI | 148545282 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5569] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.814264 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0010274 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAGC TACTGATCAG CGCTGGCCTG GTGTTCGCCG TTGCGGCGGC GGTGCAGGCC
CAAGACATGT ATGGCACGGA TATGAAGAAT ATGCCCATGG AAGGCAACGA GACCCAAGGC
AGCCAGGCGG CTCCGACTGC ATCGGCTGAG GGAACCATCA AAGCTTTGGA ACCAGGTAAA
GTTACCTTGG CGCATGGACC AGTATCAGCC CTGAAATGGC CGGCAATGAC CATGGGCTTC
AGCGCTACCG AGCAGCAACT CAAGGGACTC AAGGTAGGCG ACAAGGTCAG CTTCGATTTC
CGAATGAATG GGGGCACAGC GACGATCGTA GGCATTCGCA AGCAGTGA
|
|---|
| Protein sequence | MKKLLISAGL VFAVAAAVQA QDMYGTDMKN MPMEGNETQG SQAAPTASAE GTIKALEPGK
VTLAHGPVSA LKWPAMTMGF SATEQQLKGL KVGDKVSFDF RMNGGTATIV GIRKQ
|
|---|
| |