Gene Pput_0012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_0012 
Symbol 
ID5191126 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp14615 
End bp15394 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content55% 
IMG OID640584455 
Producthypothetical protein 
Protein accessionYP_001265373 
Protein GI148545271 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00152661 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.126895 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAA CAATTACAAC GCTGGTGGCG GCAGGTGCTG TTACTAGCGC AGCAGTGCTA 
GGTGCTGCTT ACTTCGGTCT CGTGAACGTT GGTGCGGACG ACCCACACTT CCCCGCTGTG
CATGCGTTTT TGGCCATGGC GCGGGATCGC TCGATTGAAG TCCGAGCAAG CGACATTGAG
GTGCCAAACC TTAAAGATCC TGCTCTCATC CAAGCAGGGG CAGGCAACTA CAACGCCATG
TGTATCGGTT GCCACCTCGC GCCAGGGGTG GAGAAAACTG AACTCAGCCA AGCCCTATAC
CCATCCCCAC CAAACCTCAC CGAGATAGGT GTAAGCGGTG ACCCTGCTGC TGCGTTTTGG
ACCATCAAGC ACGGTATCAA AGCGACAGGC ATGCCAGCCT GGGGTAAGAG CATGGACGAC
CAGTACATCT GGGGAATCGT CGCGTTCCTG GACCAGCTAC CGCAACTCAA TGCTGAGCAG
TACCAGATGA TGGTCGCTTC CAGTGGTGGT CACCAACATG GCGGTGGCGA AAGCGATATG
CATAACCATG AAGGCCAACA CGGTGGTGCG AAATCAGGTC ATGGAAATCA TGATGATTCC
GCAGCAAACG GCGTGGCTGA GGAAAGTCAT GATCATGGCA GTTCGCATTC GGAGTCTTCA
TCAGTAGCGG AGCACCACGG TGAACACGAG TCCGGCGAGG CGCACTCGGA CCACCACACA
GGTTCTACTC CCAAAACCCA TGTGCACAAA GACGGGAAGG AGCACACTCA TGACAAGTAA
 
Protein sequence
MKKTITTLVA AGAVTSAAVL GAAYFGLVNV GADDPHFPAV HAFLAMARDR SIEVRASDIE 
VPNLKDPALI QAGAGNYNAM CIGCHLAPGV EKTELSQALY PSPPNLTEIG VSGDPAAAFW
TIKHGIKATG MPAWGKSMDD QYIWGIVAFL DQLPQLNAEQ YQMMVASSGG HQHGGGESDM
HNHEGQHGGA KSGHGNHDDS AANGVAEESH DHGSSHSESS SVAEHHGEHE SGEAHSDHHT
GSTPKTHVHK DGKEHTHDK