Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_0012 |
Symbol | |
ID | 5191126 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 14615 |
End bp | 15394 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640584455 |
Product | hypothetical protein |
Protein accession | YP_001265373 |
Protein GI | 148545271 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00152661 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.126895 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAA CAATTACAAC GCTGGTGGCG GCAGGTGCTG TTACTAGCGC AGCAGTGCTA GGTGCTGCTT ACTTCGGTCT CGTGAACGTT GGTGCGGACG ACCCACACTT CCCCGCTGTG CATGCGTTTT TGGCCATGGC GCGGGATCGC TCGATTGAAG TCCGAGCAAG CGACATTGAG GTGCCAAACC TTAAAGATCC TGCTCTCATC CAAGCAGGGG CAGGCAACTA CAACGCCATG TGTATCGGTT GCCACCTCGC GCCAGGGGTG GAGAAAACTG AACTCAGCCA AGCCCTATAC CCATCCCCAC CAAACCTCAC CGAGATAGGT GTAAGCGGTG ACCCTGCTGC TGCGTTTTGG ACCATCAAGC ACGGTATCAA AGCGACAGGC ATGCCAGCCT GGGGTAAGAG CATGGACGAC CAGTACATCT GGGGAATCGT CGCGTTCCTG GACCAGCTAC CGCAACTCAA TGCTGAGCAG TACCAGATGA TGGTCGCTTC CAGTGGTGGT CACCAACATG GCGGTGGCGA AAGCGATATG CATAACCATG AAGGCCAACA CGGTGGTGCG AAATCAGGTC ATGGAAATCA TGATGATTCC GCAGCAAACG GCGTGGCTGA GGAAAGTCAT GATCATGGCA GTTCGCATTC GGAGTCTTCA TCAGTAGCGG AGCACCACGG TGAACACGAG TCCGGCGAGG CGCACTCGGA CCACCACACA GGTTCTACTC CCAAAACCCA TGTGCACAAA GACGGGAAGG AGCACACTCA TGACAAGTAA
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Protein sequence | MKKTITTLVA AGAVTSAAVL GAAYFGLVNV GADDPHFPAV HAFLAMARDR SIEVRASDIE VPNLKDPALI QAGAGNYNAM CIGCHLAPGV EKTELSQALY PSPPNLTEIG VSGDPAAAFW TIKHGIKATG MPAWGKSMDD QYIWGIVAFL DQLPQLNAEQ YQMMVASSGG HQHGGGESDM HNHEGQHGGA KSGHGNHDDS AANGVAEESH DHGSSHSESS SVAEHHGEHE SGEAHSDHHT GSTPKTHVHK DGKEHTHDK
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