Gene Pput_0011 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_0011 
Symbol 
ID5191125 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp14170 
End bp14625 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content57% 
IMG OID640584454 
Producthypothetical protein 
Protein accessionYP_001265372 
Protein GI148545270 
COG category[R] General function prediction only 
COG ID[COG3019] Predicted metal-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.00250694 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.180221 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAGTA AGCGCCGCTT CCTCGGTTTA AGTACCGCAG CGTCACTTCT AATCGCCTCA 
GCCGCCTTTG CTGCGGAGCC CCTGACTATC GATGTGCACC GGGACGCTAA TTGCGGTTGC
TGTAAGAAAT GGATAGCGCA CTTGGAGGCA AACGGCTTCA AGGTCGTCGA CCACGTTGAA
ACGGACATGA GGGCGGTGAA GCAAGAGCTA GGAGTAGCTC CGAGGCTGGC TTCGTGTCAC
ACCGCGGTTA TCGATGGCAA GTTTGTGGAA GGTCACGTCC CCGCAGCCCA GGTGCAGGAG
CTCATAAAGC GCAACGACCT GGCAGGCGTC GCGGTACCTG GCATGCCCGC TGGCTCACCA
GGTATGGAGG TTGATGGCAT GAAACACGCC TATCAAGTCA TCGGCCTCAC CAAGAGTGGG
GACGATCAAG TAGTTGCCAG TTATCCTGAC ACGTAA
 
Protein sequence
MTSKRRFLGL STAASLLIAS AAFAAEPLTI DVHRDANCGC CKKWIAHLEA NGFKVVDHVE 
TDMRAVKQEL GVAPRLASCH TAVIDGKFVE GHVPAAQVQE LIKRNDLAGV AVPGMPAGSP
GMEVDGMKHA YQVIGLTKSG DDQVVASYPD T