Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_0008 |
Symbol | |
ID | 5193463 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 11036 |
End bp | 12952 |
Gene Length | 1917 bp |
Protein Length | 638 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640584451 |
Product | hypothetical protein |
Protein accession | YP_001265369 |
Protein GI | 148545267 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0559853 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0972457 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTGGTC TTTTAATCAA CCCACGACCA CACCAAGACG AAAGTCTTTT GGGGTACCTG CAGCGCCTGG CGAAAGCCAA CGGATTACCC AGAAAGGAAC TGCTCACCGC CTTTGCACGA GCCGACGAGA CCGATGTTGC GGACTGGCTG CAGATGATGG AAGGACCACT GAGCTGGCCT GCGGTATCTG CTGAGTTTCG TGATCCAAGG CCCAAGGGGG TCAAGTTATG GACGACTCAT CACGCTCGTT ACTGTCCGAT CTGTTTGGGC GAAGCCGGTT ATTGGAGAGA AAGCTGGGGC TTGACCCTGG TTACGACGTG TTCTGTCCAC GGCACTGAAC TCCACGGGCG GTGCCCCAAC TGTCTGAAGG AAACCGATCC AAGCGCAATG AGTGCGAATA GTTGCCAAGC GTGTGGCACC TCATTGAGTG GGACCAATTT TGAGATCGCG CCGGCGAGTG ATACGGCCGC CTGGCTCACC TCTGGCTTTG AAGATAGGTT TTACGCCGAC TCGTTGCCAG CTGACGCGGG ATTGGCGGCC CTCACCTACG AACAGTTTCA CGAGTTGTCA TCGCGTCTCG CTGTCAGAAG TTTGCCTACG GAAAGAACCC AGCCGCTGAA GGTTGCTGAT TCGGGTTCGC TAGAGATATC GCGGCTTATG GCAAACGCGG CGGGCGTGGT TCTCATGAAC TGGCCTCTCG CATTCAGAGA ACTGCTGAGT GGCCTCAAGG CAGTCCATTC CGATAACGAA CATTGGACGC TCAGCAGATC GTTCGGCCCG ATATACCACG ACATCCACCG TGATCTGGAT GACTCTTGTT TTGACTTTCT TCGTCGAGAG TTCGAATCAT TTCTGCAGCA TGCGTGGGAA GCACCGTTAG CGAAGCGAAA TCGCAATTTG AGTGAGGAGA CGATTGAGAG ACATCGTTGG GTGTCGTTCG ATTCTGCTGC TGAAGCTTGT GGTCTCGGGG TATCAGTCAT AAAACGCCTT CATCAGGAGG GACAAATCGC CTATCGGGAG AAGGTCCATG AAGATCGAGT CTTTACGGTC GTGGACCTGG ATCATTTGAA GGCAATCTCG CAGCATCTCC AGGGCGTGGC TGATATGAAA GAAACCTCGA CTTTGCTAAG CCTCTGTCGC AATCGGGTTA GGCAGCTGCT AGCTGGTGGT ACCCTCCAGT TCTTTGGTGG AGAACCGCGC CCAGGCGAAA GGTGGCTGAT TGACTGCCGC TCGATCAACG AATTGATTGA TGAGAAGCTG CCTACCAGCT CTGACCAGAG CCTGGTGTCG ATCAACTACT TGGCCAAGCA TTCTCTGCCC AAGGGGGGTG GGTTGGTCGA GTTGGTTCAG GCAATACGTG CAGGTGAACT TCGCGCTTAC GGCCCAGCTG AGAATGGCTC GGTTGCGGTA GGGGCGTGGT TACTCAAGCC GCAAGATTTT GCAGCGTGGC AACAAGCCCG AGCTGAGAAC AAGAGTCCGG TCTTTCCCGG CCTGTCGGTA GTCAAGGCTG CTGCGCTGTT AGGCGTCAAA GAACAATGCG CATACGCGTT CGTTCGACTG GGTCTGCTAT GGAGCACTGC TGTCGAACGA GGCCGGCGTA CGCAATTGAT GGTTAAGCCT CAAGCCATCG ACAGATTCAG GCGTGGCTAT ATCTTGGGAC CGGAGATTGC GGTGTATTTG GGGAAGTCGA CCAGGGAGGC GTTCAAGCAC CTTTGGGAGG CCAGGTTTCG CCCCGTTGCG GGGCCATCCA TTCCAAACGC GGCTTGCCGG CAGTACGTTT GGGTAAGAAG CAAAAAGCTG ATCGATTACC TCGCAAGTGA AGCCGCCCAG ATCGACGATC CTGAAGCCAT CACGTTTTTA TCCACACCGA TCGCTCAGCC TCGTGATTGC CGATTCAGGC ATGTGGGATC AAGATAG
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Protein sequence | MFGLLINPRP HQDESLLGYL QRLAKANGLP RKELLTAFAR ADETDVADWL QMMEGPLSWP AVSAEFRDPR PKGVKLWTTH HARYCPICLG EAGYWRESWG LTLVTTCSVH GTELHGRCPN CLKETDPSAM SANSCQACGT SLSGTNFEIA PASDTAAWLT SGFEDRFYAD SLPADAGLAA LTYEQFHELS SRLAVRSLPT ERTQPLKVAD SGSLEISRLM ANAAGVVLMN WPLAFRELLS GLKAVHSDNE HWTLSRSFGP IYHDIHRDLD DSCFDFLRRE FESFLQHAWE APLAKRNRNL SEETIERHRW VSFDSAAEAC GLGVSVIKRL HQEGQIAYRE KVHEDRVFTV VDLDHLKAIS QHLQGVADMK ETSTLLSLCR NRVRQLLAGG TLQFFGGEPR PGERWLIDCR SINELIDEKL PTSSDQSLVS INYLAKHSLP KGGGLVELVQ AIRAGELRAY GPAENGSVAV GAWLLKPQDF AAWQQARAEN KSPVFPGLSV VKAAALLGVK EQCAYAFVRL GLLWSTAVER GRRTQLMVKP QAIDRFRRGY ILGPEIAVYL GKSTREAFKH LWEARFRPVA GPSIPNAACR QYVWVRSKKL IDYLASEAAQ IDDPEAITFL STPIAQPRDC RFRHVGSR
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