Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_4886 |
Symbol | rpsT |
ID | 5200210 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 5381839 |
End bp | 5382102 |
Gene Length | 264 bp |
Protein Length | 87 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640584443 |
Product | 30S ribosomal protein S20 |
Protein accession | YP_001265361 |
Protein GI | 148557779 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0268] Ribosomal protein S20 |
TIGRFAM ID | [TIGR00029] ribosomal protein S20 |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.222256 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGAATA CGCCGCAGGC AAAGAAGCGC ATCCGTCGCA ACGATCGTCG CGCCGAGATC AACGGTGCCC GGGTCAGCCG GATCCGCACC TTCGTGAAGA AGGTCGAGGC TGCGCTTGCC GCCGGCGACA AGACCGCCGC CACCGCCGCG CTGGCCGCTG CCCAGCCCGA GCTGTTCCGT GGCGTCTCGA AGGGCGTGGT CCACAAGAAC ACCGCCTCGC GCAAGTTCTC CCGCCTGACC AAGCGCATCG CCGCCCTCGG CTGA
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Protein sequence | MANTPQAKKR IRRNDRRAEI NGARVSRIRT FVKKVEAALA AGDKTAATAA LAAAQPELFR GVSKGVVHKN TASRKFSRLT KRIAALG
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