Gene Swit_4886 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4886 
SymbolrpsT 
ID5200210 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp5381839 
End bp5382102 
Gene Length264 bp 
Protein Length87 aa 
Translation table11 
GC content69% 
IMG OID640584443 
Product30S ribosomal protein S20 
Protein accessionYP_001265361 
Protein GI148557779 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0268] Ribosomal protein S20 
TIGRFAM ID[TIGR00029] ribosomal protein S20 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.222256 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAATA CGCCGCAGGC AAAGAAGCGC ATCCGTCGCA ACGATCGTCG CGCCGAGATC 
AACGGTGCCC GGGTCAGCCG GATCCGCACC TTCGTGAAGA AGGTCGAGGC TGCGCTTGCC
GCCGGCGACA AGACCGCCGC CACCGCCGCG CTGGCCGCTG CCCAGCCCGA GCTGTTCCGT
GGCGTCTCGA AGGGCGTGGT CCACAAGAAC ACCGCCTCGC GCAAGTTCTC CCGCCTGACC
AAGCGCATCG CCGCCCTCGG CTGA
 
Protein sequence
MANTPQAKKR IRRNDRRAEI NGARVSRIRT FVKKVEAALA AGDKTAATAA LAAAQPELFR 
GVSKGVVHKN TASRKFSRLT KRIAALG