| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4885 |
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| Symbol | |
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| ID | 5200209 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 5380919 |
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| End bp | 5381731 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640584442 |
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| Product | formamidopyrimidine-DNA glycosylase |
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| Protein accession | YP_001265360 |
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| Protein GI | 148557778 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0266] Formamidopyrimidine-DNA glycosylase |
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| TIGRFAM ID | [TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.512414 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGAGC TTCCCGAAGT AGAAACCACC GTCCGCGGTC TGCGTCCCCC GCTCGAGGGG
CGGCGTCTGA CCCGGGTCGA GACCCGCCGC GCCGACCTGC GGCGCCCCTT TCCGGCCGAC
CTGCGCCAGC GGATGACCGG GGCGACGATC ACCGGGCTCG GCCGCCGCGC CAAATATGGC
CTGATCGAGA CCGATCGCGG CGACGTGATG GTCTTCCACC TCGGCATGTC GGGCCGCTGG
CGGATCGACC CGAGCGAGAT CGGCGCGCAC GATCATCTGG TGCTGGAGAC CGACGAGGGG
CGGACGCTGT CGCTGTGCGA CCCGCGCCGC TTCGGATCGG TCGACCTCGT CCGGGGCGAG
GAACTCGCCG GGTTCGGCCC GTTCAAGGCG CTGGGGCCCG AGCCGCTGGG CCCCGATCTG
ACCGGCGCCC ATCTCGCCGG GGCGCTCGAA GGGCGCGTCG CGCCGATCAA GGCGATGCTG
CTCGACCAGC GGATCGTCGC CGGGCTCGGC AACATCTATG TGTGCGAGGC GCTGCACATG
ACCGGCATCG CGCCGACCAC CATGGCGGGC CGGATCGCGA AGAAGCGGCT CGACCGGCTG
GTCGATTCGA TTCGCGAGGT GCTGGCGGCG GCGATCGAGG CGGGCGGCTC CACGCTGCGC
GACTATGCCC GGCCCGATGG CGAGCTCGGC TATTTCGCCA AGCAGTGGCG CGTCTATGGC
CGCGAAGGCG AGCCGTGCCA TTGCGGCACC GTGATCCGGC GCCGCGTCGA TGGCGGCCGA
TCGACCTTCT ACTGCCCCAA ATGCCAGAAA TAG
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| Protein sequence | MPELPEVETT VRGLRPPLEG RRLTRVETRR ADLRRPFPAD LRQRMTGATI TGLGRRAKYG
LIETDRGDVM VFHLGMSGRW RIDPSEIGAH DHLVLETDEG RTLSLCDPRR FGSVDLVRGE
ELAGFGPFKA LGPEPLGPDL TGAHLAGALE GRVAPIKAML LDQRIVAGLG NIYVCEALHM
TGIAPTTMAG RIAKKRLDRL VDSIREVLAA AIEAGGSTLR DYARPDGELG YFAKQWRVYG
REGEPCHCGT VIRRRVDGGR STFYCPKCQK
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