Gene Swit_4883 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4883 
Symbol 
ID5200018 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp5378439 
End bp5379971 
Gene Length1533 bp 
Protein Length510 aa 
Translation table11 
GC content72% 
IMG OID640584440 
Product2-octaprenylphenol hydroxylase 
Protein accessionYP_001265358 
Protein GI148557776 
COG category[R] General function prediction only 
COG ID[COG0661] Predicted unusual protein kinase 
TIGRFAM ID[TIGR01982] 2-polyprenylphenol 6-hydroxylase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACCCCCA GCTTCGTCCA TATCTGGCGG CTGTTCCGCT GGGGCCGCAC GCTCGCGCGC 
CACGGCGCGC TGCGCGGGAT CGAACGCGAT CCGCTGGCCC CGCCGCAGGT CCGGCGCTTG
AGCCGAATCC TGCGCATCGG CGCCCGCCTG CCCGCGCAGC CCGCTTACGC CGACGCCTTC
GAGGCGCTGG GCCCGGCGGC GATCAAGCTG GGCCAGGCGC TCGCCACCCG CCCCGATCTG
GTCGGCGAGC AGGCGGCGGC CGAATTGTCG CGGCTTCAGG ACGCTCTGCC CCCCGCCCCC
TTCCCGCTGA TCCGCGCGGC GATCGAGCAG GGCCTCGGCA AGCCGATCGA GGAACTGTTC
GCCGCGTTCG AGGAAGAGCC GGTCGGCGCC GCCTCGATCG CGCAGGTCCA CCGCGCGGTG
ACGACCGACG GCCGCACCGT CGCGGTCAAG GTGCTGCGGC CGGGCATCGA GGAGGAGATG
GCCCGCGCGA TCGAGACCTA TGAATGGGCC GCCGCGCATG CCGAGCTGAT CGGCGGCGAA
TTCGCGCGGC TGCGCCCGCG CCTCGTCATC GCCACCTTCC GCCAGTGGAC CGCGCGCGAG
CTGGACCTGC GCCGCGAGGC CGCCTCGGCA TCCGAGCTGG CCGAGAACAT GGCGGCGGTG
CCGGGCTTCG TCGTCCCCGC GATCGACTGG AGCCGCACCG CGCGCCGCGT CCTCACCATG
GAATGGATCG ACGGCATCAA GATGGCCGAC CGGACGGCGA TCGCCGCCGC CGGGCATGAT
GGCAAGGCGC TCGGAGCGCT GCTCGTCCAG GCCTTCCTGC GACAGGCGAT CGCCGACGGC
TTCTTCCACG CCGACCTCCA CCACGGCAAT CTGTTCGCGC TGCCCGACGG GCGGATCGCG
GCGATCGACT TCGGCATCAT GGGCCGGATC GACCGGCGCG CGCGGGTGTG GCTGGCGGAG
ATCCTGCACG GGCTGATCAC CGGCAACTAC AAGCGCGTCG CCGAGATCCA TTTCGAAGCG
GGCTATGTGC CGCCGCACCA CAATATCGGC GAGTTCACCA CCGCGCTGCG CGCCGTCGGC
GAGCCGATCC GCGGGCTGCC CGCCAAGGAC ATCTCGATCG GCCAGATGCT CGACGGCCTG
TTCACGATCA CCCGCGACTT CGACATGCAG ACCCAGCCGC ACCTGCTGCT GCTCCAGAAG
ACGATGGTGA TGGTCGAAGG CGTGGCGACC GGCCTCGATC CCGACCTGAA CATGTGGGAG
ACGTCGGGCC CGTTCGTGAA GGAATGGATC CGCTCCGAAC TCGGCCCCGA GGCGTGGCTG
GCCGACCGCA TCGTCGGCGA CCTGCGCACC CTGGCCGGGC TGCCCGACCT CGTCCGCCGG
ATCGAGGCGC AGTTCCCCGC CCCCGGCGGC GCCCCCCCGC CCCCGCCGCT GCCCGAGGTG
CAGGTGATCC GCATCGGATC GGGCTGGCGC TACGCGGCGG TCGCGGCGCT GGCGGCCGTG
GCTGGCGCGG CGGCGATGCT GCTCGTCGGT TGA
 
Protein sequence
MTPSFVHIWR LFRWGRTLAR HGALRGIERD PLAPPQVRRL SRILRIGARL PAQPAYADAF 
EALGPAAIKL GQALATRPDL VGEQAAAELS RLQDALPPAP FPLIRAAIEQ GLGKPIEELF
AAFEEEPVGA ASIAQVHRAV TTDGRTVAVK VLRPGIEEEM ARAIETYEWA AAHAELIGGE
FARLRPRLVI ATFRQWTARE LDLRREAASA SELAENMAAV PGFVVPAIDW SRTARRVLTM
EWIDGIKMAD RTAIAAAGHD GKALGALLVQ AFLRQAIADG FFHADLHHGN LFALPDGRIA
AIDFGIMGRI DRRARVWLAE ILHGLITGNY KRVAEIHFEA GYVPPHHNIG EFTTALRAVG
EPIRGLPAKD ISIGQMLDGL FTITRDFDMQ TQPHLLLLQK TMVMVEGVAT GLDPDLNMWE
TSGPFVKEWI RSELGPEAWL ADRIVGDLRT LAGLPDLVRR IEAQFPAPGG APPPPPLPEV
QVIRIGSGWR YAAVAALAAV AGAAAMLLVG