| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4865 |
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| Symbol | |
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| ID | 5198214 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 5360440 |
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| End bp | 5361414 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640584422 |
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| Product | type II secretion system protein |
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| Protein accession | YP_001265340 |
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| Protein GI | 148557758 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4965] Flp pilus assembly protein TadB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGACGA TGCTCTTCCT GATGGTCATG GCCGCGGTCG TGCCCGTCTT CATCTTCGTG
CTGGCGCGCC CGCCCGCGCA GCGCGCCTTC GCGCGTCGCC TGTCGACGGT GCGGGGACGC
TACAACGTCA ATGGCGAGCC CGGCGTCAAC GAACAGGTCC GCAAGCTGCT CGCCAGCCGC
GCGACGGTGG TGCGGCGCGA GAAGACGCTG CTCAACCGCT TCCTGCCCGA TCCGGCCGAC
ATCCATCACC AGATCGAGGC AGCCGGCAAG AAATGGACGG TCCGGCAATA TTATACCGGA
TCGGGGTTCG CCTTCGCAGT GCCGATGCTG CTGCTCATGC TGGTCGGGCT GCCGGCGTGG
ATGGCGCTGA TCGTCGGCGC CGCGGCGGGG CTCGGCCTCC CCCGGCTGGT GCTGAACATC
CTCGCCAAGC GGCGGATCGC GCAGTTCATC ACGCGCTTCC CCGACGCGAT CGAACTGCTG
GTGCGCGGCC TGCGCGCCGG CCTGCCGATC GCCGAGACGA TGGGCGCGGT CGCGTCCGAG
ATCGAAGGTC CGGTCGGCAG CGAGTTCCAG GCGGTCAGCG ACCGCATGCG GATCGGCCGC
ACGCTGGAGG GCGCATTGCA GGAGACCGCC GATCGGCTGG GCACCGCCGA GTTCCAGTTC
TTCGTCATCA CCCTCGCGAT CCAGCGCGAG ACCGGCGGCA ACCTCGCCGA GACGCTCGGC
AACCTCGCCG ACGTGCTGCG CAAGCGCATG CAGATGAAGC TCAAGATCTC CGCAATGTCG
TCCGAATCCA AGGCGTCGGC CTATATCATC GGCGTCCTGC CCTTCGTCGT GTTCGGGCTG
ATCAGCTTCA TCAGCCCGAC CTACATGGCC GGCTTCTTCG CCGACCAGCG GCTGATGATC
GCGGGCGCGG GCGGACTGAT CTGGATGTCG ATCGGCGCCT ATATCATGCG CCAGATGATC
AATTTCGAGA TCTGA
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| Protein sequence | MLTMLFLMVM AAVVPVFIFV LARPPAQRAF ARRLSTVRGR YNVNGEPGVN EQVRKLLASR
ATVVRREKTL LNRFLPDPAD IHHQIEAAGK KWTVRQYYTG SGFAFAVPML LLMLVGLPAW
MALIVGAAAG LGLPRLVLNI LAKRRIAQFI TRFPDAIELL VRGLRAGLPI AETMGAVASE
IEGPVGSEFQ AVSDRMRIGR TLEGALQETA DRLGTAEFQF FVITLAIQRE TGGNLAETLG
NLADVLRKRM QMKLKISAMS SESKASAYII GVLPFVVFGL ISFISPTYMA GFFADQRLMI
AGAGGLIWMS IGAYIMRQMI NFEI
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