| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4835 |
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| Symbol | |
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| ID | 5196104 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 5326993 |
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| End bp | 5328252 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640584392 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001265310 |
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| Protein GI | 148557728 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00880] Multidrug resistance protein
[TIGR01297] cation diffusion facilitator family transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGTTT CAGAGCGTGG CAAGAGCAAC GCCACCGTCT TCATCGTCGC CACCATCCTG
ATCGACGCGA TCGGCTTCGG CATCGTCATC CCGGTGCTGC CGCGCCTCGT CATGGAGGTC
GGCCAGCTCG ACCTGCCCGC GGCGATCCGC GTGGGCGGCT GGCTGTCGGT CGTCTATGCG
CTGATGCAGT TCCTGTGCGG GCCGCTCGCC GGCAATCTCG GCGATCGCTT CGGCCGGCGG
CCGGTGCTGC TGCTGTCGCT CGCCGGCCTC GCCGTCGACT ATGTGCTGAT GGGGTTCGCC
CATACGCTCG CTTTGCTGTT CCTCGGGCGG CTGATCGCGG GCGTGTTCGG GGCGTCGTTC
AGCCCGGCGA CCGCCGCGCT GGCCGACATC ACCGCGCCCG AGGACCGCGC CAAGCGCTTC
GGGCTGGTCG GCGCCGCCTT CGGCATCGGC TTCATCCTCG GCCCGGCGCT CGGCGGCATC
CTCGGCGAGT TCGGGCACCG CATGCCCTTC TACGCCGCCG CGATCTGCTC GGCGCTCAAC
TTCACCTTCG GCTTCTTCTT CTTTCCCGAG ACGCTGCCGC CGGAGAAGCG CCGGCCCTTC
AGCTTCGCCC GCGCCAACCC GGTCGGCGCG CTGCTGCAGG CGCGCAAGAT GCGCGGCGTG
CTGGGACTGT CGGGCATCCT GCTGCTGTGG AACATCGCCT CGATGGTCTA TCCGGCGACC
TGGTCCTTCT TCGCGATCGC CCAATATGGC TGGTCGAACG GGATGATCGG CCTGTCGCTG
GCGCTCGCCG GCATCTCCAT GGCGGTGGTC CAGGCCACCG TTCTCGGCCG GGTGATCAAG
CGCTTCCGCG AGCGGCGCAC CGCGATGATC GGGGTCGCCG TCGCCGCCTT CGGCTATCTC
GGCTACGCCC TCGTGCCCTA TGCCTGGTTC GGCATGATCG TCATCGTGAT CACCGCGCTG
CAGGCGCTGG TCCAGCCGTC GATCACCGCG CTGATGTCGC AGCGCGCGCC CGCCGACGCG
CAGGGCGAGA TGCAGGGCTT CATCGGCAGC CTCAACGCGG TCGGCGCGAT CGCGGCGCCG
CTGCTGCTCA ACCCCGCGCT CGCCTGGTTC ACCGGCCCCG ACGCGCCGGT CCATTTCCCC
GGCGCGGCCT TCGTCATCGC CTCGGCCTTC GCCTTCGCCG CGCTCCTGTC GCTGGCGATG
ACGCGGCGGA TACGCGACGA CGCGGCGGTG GATCAGATGC CGTCGGCGAC CGGGGCGTAG
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| Protein sequence | MSVSERGKSN ATVFIVATIL IDAIGFGIVI PVLPRLVMEV GQLDLPAAIR VGGWLSVVYA
LMQFLCGPLA GNLGDRFGRR PVLLLSLAGL AVDYVLMGFA HTLALLFLGR LIAGVFGASF
SPATAALADI TAPEDRAKRF GLVGAAFGIG FILGPALGGI LGEFGHRMPF YAAAICSALN
FTFGFFFFPE TLPPEKRRPF SFARANPVGA LLQARKMRGV LGLSGILLLW NIASMVYPAT
WSFFAIAQYG WSNGMIGLSL ALAGISMAVV QATVLGRVIK RFRERRTAMI GVAVAAFGYL
GYALVPYAWF GMIVIVITAL QALVQPSITA LMSQRAPADA QGEMQGFIGS LNAVGAIAAP
LLLNPALAWF TGPDAPVHFP GAAFVIASAF AFAALLSLAM TRRIRDDAAV DQMPSATGA
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