| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4741 |
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| Symbol | |
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| ID | 5198776 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 5217123 |
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| End bp | 5218307 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640584297 |
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| Product | peptidoglycan-binding LysM |
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| Protein accession | YP_001265216 |
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| Protein GI | 148557634 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4254] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGCAA AGGTGGGGCG ATCTTGGTTC TTCCTTCCCG TCGCGGCCCT GCTGGCCGCG
GCGCCGCTGG CCGCGCAACC GGCGGCGGAG CCGATGCTCC GCTACACGGT GCGGCCGAAC
GACACGCTGT CGGCGCTCGC CAGGGATTTC CTGGTCGGCG GCGACTATCG GGAGGTCCAG
CGACTCAACA AGGTGGCCGA TCCGTATCGG ATGCCGATCG GCTCGATCCT GCTGATCCCC
GACCGGCTGC TCCGCACCGA GCCGGTGGTC GGCAAGGTCG TCTCCTTCCG CGGCAGCGCG
ACGATCGACG GGCGCCAGGC CGCGCTCGGC GGCGAGGTGC GCCAGGGGAT GCGGGTCGAG
ACCGGCGCCA ACGCCTCGAT CGCGATCGCG ATGCCCGACG GCAGCACGAT CGCGCTGCCG
TCGCAGAGCC GCATCCTCGT CGACAGGCTC CGCCGCATCC TGCTGACCGA TGGGCTCGAC
CGCAATTTCC GGCTGGAGAC CGGCCGCTCG CGGTCGAGCG TGATCCCGAT GAAGGACCCG
GCCAGCAATT TCCGGGTGAC CACGCCGCTG TCGGTGGCCG CCGTGCGCGG CACCGAGTTC
CGCGTCGCGG TCGATGAGAG CGGCGAGCGC GCGCTGACCG AGGTCGTCGC CGGCACGGTC
GGCGTCGCCG CCGGCCCCGA TCCGGCGGAG GTCGCCGTGC CCAGGGGCTA TGGCGCGATC
AGCACCCCCG CCGGCACCGA GCCGCCGGTC GCGCTGCTGC CCCCGCCCAA GCTGCTCCAG
CTCGAAAAGA CCGAGACCGG CGTCAGCATC GTCGCTGAGC GGATCGAGGG AGCCAAGGCC
TATCGCGTCG AGCTGGCGAC CGACGTCGCC TTCCTGAACA TCATCGAGGA GGCGCAGTCC
GACGAGCCCA GCATCAGCCT CGCCCTGCCG CAGGGCGCGA CCTTCTTCGT CCGGCTGACC
GCGATCGCCA CCTCGGGGCT GGAGGGGCTT CCGGGAATCT ATGCGCCGGG CGTGCGCCGC
TCCGCTCCGC CGCCCGCCCC CGCATCCGGG CCCAGCGCCG ACGCGGGCGC GGCGGAGCCC
CTGCCCTTCC GGCTCTGGGC CGAGCCCCGG CCGCTTCCGA TCCGCCTGAC CGGCCATGGC
CTTGTCCAGC CGCGCGCCAT CGCCGCCCAC ACGTCTCTAC GCTGA
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| Protein sequence | MPAKVGRSWF FLPVAALLAA APLAAQPAAE PMLRYTVRPN DTLSALARDF LVGGDYREVQ
RLNKVADPYR MPIGSILLIP DRLLRTEPVV GKVVSFRGSA TIDGRQAALG GEVRQGMRVE
TGANASIAIA MPDGSTIALP SQSRILVDRL RRILLTDGLD RNFRLETGRS RSSVIPMKDP
ASNFRVTTPL SVAAVRGTEF RVAVDESGER ALTEVVAGTV GVAAGPDPAE VAVPRGYGAI
STPAGTEPPV ALLPPPKLLQ LEKTETGVSI VAERIEGAKA YRVELATDVA FLNIIEEAQS
DEPSISLALP QGATFFVRLT AIATSGLEGL PGIYAPGVRR SAPPPAPASG PSADAGAAEP
LPFRLWAEPR PLPIRLTGHG LVQPRAIAAH TSLR
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