| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4700 |
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| Symbol | |
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| ID | 5199094 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 5170803 |
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| End bp | 5171195 |
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| Gene Length | 393 bp |
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| Protein Length | 130 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640584254 |
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| Product | 3-dehydroquinate dehydratase |
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| Protein accession | YP_001265175 |
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| Protein GI | 148557593 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0757] 3-dehydroquinate dehydratase II |
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| TIGRFAM ID | [TIGR01088] 3-dehydroquinate dehydratase, type II |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.0672419 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTCGGCA CCCGCGAGCC GGAGATATAC GGGACGACGA CGCTCGACGA CATCGCCGGC
ATGCTGGAGG ACCGCGCGCT CGAACTGGGG TTCGAGATCG ACATGCGCCA GTCGAACCAC
GAAGGGCACC TCGTCGACTG GGTCCAGGAG GCGAACGCCT CCGGCGCCAG GGCGGTCATC
ATCAATCCCG GCGCCTATAC CCACACCTCG ATCGCGCTCC ACGACGCGAT CAAGGGGGTC
TCGATCCCGG TGATCGAGGT GCATCTGTCC AATCCGCATG CCCGCGAGAC CTTCCGCCAC
GTCAGCTATG TCGGGCAGGC GGCGAAGGGT TCGATCATGG GGTTCGGCGC GCAATCCTAC
ATGCTTGCGC TGGACGCCGC CGCCCGCATC TGA
|
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| Protein sequence | MLGTREPEIY GTTTLDDIAG MLEDRALELG FEIDMRQSNH EGHLVDWVQE ANASGARAVI
INPGAYTHTS IALHDAIKGV SIPVIEVHLS NPHARETFRH VSYVGQAAKG SIMGFGAQSY
MLALDAAARI
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