Gene Swit_4684 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4684 
Symbol 
ID5198419 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp5152054 
End bp5152353 
Gene Length300 bp 
Protein Length99 aa 
Translation table11 
GC content59% 
IMG OID640584238 
Productexcinuclease ABC subunit C 
Protein accessionYP_001265159 
Protein GI148557577 
COG category[L] Replication, recombination and repair 
COG ID[COG2827] Predicted endonuclease containing a URI domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.365942 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTTCA TGAAAGGCGG ACACGTCTAC ATCATGAGCA ATGGCGTTTC GGGAACGCTG 
TACCTTGGCG TGACGGCCGA TCTCGCCGCC CGTGTTTACC AGCATCGGAT CGGCGAGGGT
TCGGCCTTCT GCCGTGAGCA TGGGCTCACG AAGCTGGTCT ATGCCGAGCC TCACGACAGG
ATCGAAAACG CCATCGCCCG CGAGAAGGCC CTGAAGAACT GGAAGCGGGC CTGGAAGATC
AACCTGATCG AAAAGGCCAA TCCCGGCTGG CGCGATCTCT ATGAGGAGAT CATCGCCTAG
 
Protein sequence
MAFMKGGHVY IMSNGVSGTL YLGVTADLAA RVYQHRIGEG SAFCREHGLT KLVYAEPHDR 
IENAIAREKA LKNWKRAWKI NLIEKANPGW RDLYEEIIA