Gene Swit_4648 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4648 
Symbol 
ID5196963 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp5112507 
End bp5113256 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content71% 
IMG OID640584202 
Producthypothetical protein 
Protein accessionYP_001265123 
Protein GI148557541 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2981] Uncharacterized protein involved in cysteine biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGCCTC CCGGAACCCC GGCCGCCGTC AACCGTAGTG CCGCCATGAT CGGCATCCTT 
CCCCTCGCTG TCGGCGACCT GGCCGACTCC CGGATTCTCG GCGTCCTGCT CCGGTCGCTG
CTGATCACCC TGCTGATCTT CGCGGCGCTG GGCGTCACGC TCGGCTGGGC CCTGGCGGGC
AGCGATCCCT GCGCCGCGTT CGGCGACATG GAATGCACGC TCAGCCTGGC CGAGGGCGGC
GTCGGCGCCG TGGTGCTGAC CCTGCTCGCG CTGTGGTTCC TGTTCCCCGC CGTCGCGCTG
GGGGTGGTCT GCGCCTATGT CGAGCGGATC GCGGCGATCG TCGAGCAACG CCATTATCCG
CAGGCCGCGG TCGCGGCGCG ATCGATCGGG CCGGGCGCCG CCGTCCTGCT CGGCCTGCGA
TCGGCCGCGC GCGTGCTGAT CTACAATCTC GTCGCCCTGC CCTTCTACGT CATCCTGCTG
TTCACCGGCA TCGGGCCGCT GATCCTGTTC GTGGTCGTCA ACGGCATCGC CTTCGGCCGC
GACCTGGGCG AGATGGTCGC CGCGCGCCAC GCCGATCGGG CCGAGCGGCA TGGCTGGCTG
GGAAGGACGC GGATCGAGCG GATGCTGATC GGATCGACCG TGACCGGCCT GTTCCTGATC
CCCTTCGTCA ACCTGATCGC GCCGATATTG GGCGCGACGA TGACGACCCA CCTCTACCTG
CGCTCGCGCC TCGGCCGCGC CGCGGGCTGA
 
Protein sequence
MTPPGTPAAV NRSAAMIGIL PLAVGDLADS RILGVLLRSL LITLLIFAAL GVTLGWALAG 
SDPCAAFGDM ECTLSLAEGG VGAVVLTLLA LWFLFPAVAL GVVCAYVERI AAIVEQRHYP
QAAVAARSIG PGAAVLLGLR SAARVLIYNL VALPFYVILL FTGIGPLILF VVVNGIAFGR
DLGEMVAARH ADRAERHGWL GRTRIERMLI GSTVTGLFLI PFVNLIAPIL GATMTTHLYL
RSRLGRAAG