| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4621 |
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| Symbol | |
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| ID | 5198487 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 5086505 |
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| End bp | 5087776 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640584176 |
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| Product | Rieske (2Fe-2S) domain-containing protein |
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| Protein accession | YP_001265097 |
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| Protein GI | 148557515 |
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| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.252321 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTGACG ACATCCGTGC TTGGCTGGAC GCGGAAAGCG GCCTGCCGGA TCAGCCGCTG
CGAGGGGAAT TCTATGTCGA TGCCGGGATC TTCGCGGCGG AGATGCGGGA TGTTCTCGGC
CGGCAATGGC TCTATGCGGA CCATGTCTCC CGCATTCCCC GGCCGGGGGA TTATTTCCTG
TTCGAGGTCG GCGGCGAATC GATCATCGTC GTGCGCCGCA AGGACGGGAC GATCGGCGCC
TATTTCAACG TCTGCCGGCA TCGCGGCTCG CGCATCTGCC TCGACCGGCA GGGATCGCTA
TCGTCCTTCG TCTGCCCCTA TCATGCGTGG ACCTATGATC TCGACGGGGC GCTGCGCGGC
GCGGCGCATA TGCCGGACGA CTTCGAAAGG CGCGACGCCG GGCTGATGCC CTGCCACGTC
CGCGAGCTGG AGGGGCTGAT CTTCCTCTGC CTGGCGGAAG GGGAGGCTCC CGATTTCGAC
GCCCTGGCCG AGATCGCGCG TCCCTATCTG GCGCTGAACG GCCTGGCGCC CGCCCGGCTG
GCGGCCCGGC GATCCTATCC GACCTCGGCC AACTGGAAGC TCGTCGTCGA CAATTTCCAG
GAATGCTATC ACTGCGCGCC CGCCCACAAG CTCTATTCGA GCGCGCATTC GAAGGACAAG
CTGCTGGCCT TCGGGGCCGG TCCCGGCTCC GGTCCGGTCG ATGCGGCCGA ACGTTTCTCC
GGCGAACTGG CGACATGGCG GGAAAGGGCG TCGGCGGCCG GCACCTGGCT CGATGCGCGC
GCGGAGGAAG AGGACGACAT CCGTTCCATC TGGAGCGTCG GGCGGCTGCC GATCAAGGCC
GGGGCGCTCA CCGAAAGCGT CGATGGGGCT CCCGTGTCGC GATTGATGGG CCGCTTCGCC
GAATTCGACG GAGGTCACAG CGCCGTGGCC TTCAACGTCT TCTCCTATTT CCTCGCCAGC
AACGACCATG TGGTCATGAT CCGGTTCACG CCGCGCGGCG TCCTGGAGAC CGATGTGGAG
TTCCAGTGGT TCGTCCACCC CGAGGCGGAG GAGGACGTGG ACTATGAGGT CGAGCGCCTC
GTGCGGGTCT GGGACGTGAC CACCACCGAG GACAAGCGGA TCACCGAGGA CAACCAGGCC
GGCGTGGCGT CGAGCCGCTA CCGCCCCGGG CGCTTCTCCG CGCTCGAAGG GCGGCTGTCC
ACGATCAAGC GATGGTATCT CCACGAAATG GCGACCGCGT CGGTCCCATC CCATGAGGAG
TTGGGTGCAT GA
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| Protein sequence | MRDDIRAWLD AESGLPDQPL RGEFYVDAGI FAAEMRDVLG RQWLYADHVS RIPRPGDYFL
FEVGGESIIV VRRKDGTIGA YFNVCRHRGS RICLDRQGSL SSFVCPYHAW TYDLDGALRG
AAHMPDDFER RDAGLMPCHV RELEGLIFLC LAEGEAPDFD ALAEIARPYL ALNGLAPARL
AARRSYPTSA NWKLVVDNFQ ECYHCAPAHK LYSSAHSKDK LLAFGAGPGS GPVDAAERFS
GELATWRERA SAAGTWLDAR AEEEDDIRSI WSVGRLPIKA GALTESVDGA PVSRLMGRFA
EFDGGHSAVA FNVFSYFLAS NDHVVMIRFT PRGVLETDVE FQWFVHPEAE EDVDYEVERL
VRVWDVTTTE DKRITEDNQA GVASSRYRPG RFSALEGRLS TIKRWYLHEM ATASVPSHEE
LGA
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