| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4608 |
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| Symbol | |
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| ID | 5199078 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 5065374 |
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| End bp | 5067026 |
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| Gene Length | 1653 bp |
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| Protein Length | 550 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640584163 |
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| Product | crotonobetaine/carnitine-CoA ligase |
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| Protein accession | YP_001265084 |
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| Protein GI | 148557502 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGTTC ATGAAGACGC CGCGCAGCCT GTCATGGCGG GTAGCGAGGT TCTTGCCGAT
CGATCGATCC CCGCCCTGCT GACGCGGCGG GCGGCGCTGG GCGACAAGCC TCTGGTCATC
TTCGGCGACA CGCGCTTCGG CTATGGCGAG ATGGCGGCGC GCGCGGCGGC GGCGGGCGCG
CTGCTGCGCG ATGCCGGCGT GGCGCGGGGC GACCGGGTCG CGATCTTCTG CGGCAACCGG
ATCGCCTTTC TCGACCTGTT CCTCGGCTGC GCCTGGATCG GCGCGGTGGC GGTGCCGATC
AACCATTTCG CGCGCGGGCC GCAACTCCAG CACATATTGG GCAACAGCGG CGCGCGCCTG
ATCGCCGCCG ATGCCGACGG CGCCGCCGCG CTCGACCATG TCGATCCCTC CGCGCTGGCG
CTGGCCGAGG TCTGGCTGCT CGACGGCGAG AATAGCCCGC CCCCCGCCGC CGGCCATTGG
CCCGCGGCCT GGAAGGTCGG CCCGATGCCG CCGCTGGACG CGGGCGCCGA CGCCGCATCG
CCGCGCCCCG GCGACATGGC CGCGATCATC TACACATCAG GCACCACCGG CCCCTCCAAG
GGGGTCTGCT GCCCGCATGC GCAATTCTAC TGGTGGGGCG CCCATTCGGT CGACCTGCTG
GAGATCGAGG CGCGCGACGT GCTGCTGACC ACCCTGCCCC TGTTCCACGT CAACGCGCTC
GCCACCTTCT TCTCGGCGCT GCTCAGCGGG GCGACGCTCG TCGTCCTCGA ACGCTTCTCG
GCGAGCGGCT TCACCGATGC GCTGCGCAAG CACCGGGCGA CCGTCACCTA TCTGCTCGGC
GCGATGGTCT CGATCCTGCA GTCGACCCCG CCGTCCGACC GCGACAACGA CCATCCGACG
ACGCGCGCGC TGGCCCCCGG CGTCTCGGCC GCGCTCGCCG CCGACTTCCG CGCGCGCTTC
GGCATCGGCG CGGTCGACGG CTATGGATCG ACCGAGACCA ATTTCGTCAT CGGCGACCGG
CTGGCCGACC AGAAGCCGGG CAGCATGGGT CGCGTCCGTC CCGGCTTCAC GGCGCGCGTG
GTCGACGAGG AGGACAATGA ACTGCCGCCG GGCGTGCCGG GCGAACTGGT CGTGCGCGCC
GACGAGCCCT TCGCGATGGC GACCGGCTAT TTCGAGATGG CGTCGGCGAC CGTCGCCGCC
TGGCGCAACC TGTGGCTCCA CACCGGCGAC CGCGTCGTCC GCGACGCCGA CGGCCGCTTC
ACCTTCATGG ACCGGATCAA GGACGCGATC CGGCGGCGTG GCGAGAACAT CTCCGCCTAT
GAGGTCGAGC AGGTGCTGGC GAGCCATCCG GCGGTCGCCC AGGCCGCGGT CTTCCCGGTC
CGTTCCGAAC TGACCGAGGA CGAGGTGATG GCGGCGGTGG TGCTGAAAGA AGGGATGGCC
CTCGATCCGG TCGCGCTGCT CGATTATTGC AAGCCGCGGA TGAGCTATTT CTCGGTGCCG
CGCTATGTGC TGTTCGCGGA CCGGCTGCCG ATGACGGAGA ATGGCAAGGT GCAGAAATAC
CGGCTGCGCG AGATCGGGGT GACGCCCGAG ACATGGGACC GGGAGGCGGC CGGCTACACC
GTCGGTCGCG GCGGCGGGGC GCGGCGCGCG TGA
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| Protein sequence | MPVHEDAAQP VMAGSEVLAD RSIPALLTRR AALGDKPLVI FGDTRFGYGE MAARAAAAGA
LLRDAGVARG DRVAIFCGNR IAFLDLFLGC AWIGAVAVPI NHFARGPQLQ HILGNSGARL
IAADADGAAA LDHVDPSALA LAEVWLLDGE NSPPPAAGHW PAAWKVGPMP PLDAGADAAS
PRPGDMAAII YTSGTTGPSK GVCCPHAQFY WWGAHSVDLL EIEARDVLLT TLPLFHVNAL
ATFFSALLSG ATLVVLERFS ASGFTDALRK HRATVTYLLG AMVSILQSTP PSDRDNDHPT
TRALAPGVSA ALAADFRARF GIGAVDGYGS TETNFVIGDR LADQKPGSMG RVRPGFTARV
VDEEDNELPP GVPGELVVRA DEPFAMATGY FEMASATVAA WRNLWLHTGD RVVRDADGRF
TFMDRIKDAI RRRGENISAY EVEQVLASHP AVAQAAVFPV RSELTEDEVM AAVVLKEGMA
LDPVALLDYC KPRMSYFSVP RYVLFADRLP MTENGKVQKY RLREIGVTPE TWDREAAGYT
VGRGGGARRA
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